H5TH7BCX2_l02n02_gal-ssb_gal_dox-2.352000000b0e7d.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H5TH7BCX2_l02n02_gal-ssb_gal_dox-2.352000000b0e7d.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	44041410
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	4665230	10.592826160651986	Illumina Single End PCR Primer 1 (100% over 51bp)
GTGACTGGAGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCG	110232	0.25029171409362233	Illumina Single End PCR Primer 1 (100% over 41bp)
GTGACTGGAGTTAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCT	109612	0.24888394808431427	Illumina Single End PCR Primer 1 (100% over 39bp)
AGATCGGAAGAGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCT	69855	0.15861208803260385	Illumina Single End PCR Primer 1 (100% over 39bp)
AGGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCC	45900	0.10422009649554817	Illumina Single End PCR Primer 1 (98% over 50bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCGCCG	575195	43.28046	45
GCACACG	147145	42.68542	18
GGTCGCC	587585	42.2811	44
CACACGT	115005	42.277973	19
AGCACAC	153770	41.969116	17
TGGTCGC	589220	41.809006	43
ACACGTC	69915	41.756714	20
GTGGTCG	590615	41.67322	42
GAGCACA	165730	41.521904	16
AGAGCAC	166920	41.300514	15
GGTGGTC	596815	41.245407	41
CGGTGGT	600210	40.869194	40
CACGTAG	47545	40.360073	21
ACGTCAG	50390	40.259937	22
ACACGTA	48510	39.76581	20
CACACGA	35380	39.682587	19
GTGACTG	61120	39.554688	1
ACACGAG	35495	39.312412	20
TGACTGG	61370	38.86542	2
CACGTCA	52730	38.57926	21