[2023-06-12 16:37:28,888] multiqc [DEBUG ] No MultiQC config found: /share/apps/multiqc/1.9/lib/python3.8/site-packages/multiqc_config.yaml [2023-06-12 16:37:28,888] multiqc [DEBUG ] No MultiQC config found: /home/gencore/.multiqc_config.yaml [2023-06-12 16:37:28,888] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml [2023-06-12 16:37:28,890] multiqc [DEBUG ] Loading config settings from: /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml [2023-06-12 16:37:28,890] multiqc [DEBUG ] New config 'report_section_order': {'general_stats': {'order': 1000}, 'demux_report': {'order': 900}, 'demux_report-1': {'order': 900}, 'demux_report-2': {'order': 900}, 'undetermined_barcodes': {'order': 800}, 'run_stats': {'order': 700}, 'fastqc': {'order': 500}} [2023-06-12 16:37:28,891] multiqc [DEBUG ] Command used: /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/H5NT3BGXT/merged [2023-06-12 16:37:29,083] multiqc [WARNING] MultiQC Version v1.14 now available! [2023-06-12 16:37:29,083] multiqc [INFO ] This is MultiQC v1.9 [2023-06-12 16:37:29,083] multiqc [DEBUG ] Command : /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/H5NT3BGXT/merged [2023-06-12 16:37:29,083] multiqc [DEBUG ] Working dir : /scratch/gencore/logs/html/H5NT3BGXT/merged [2023-06-12 16:37:29,083] multiqc [INFO ] Template : default [2023-06-12 16:37:29,083] multiqc [DEBUG ] Running Python 3.8.6 (default, Oct 11 2020, 20:34:31) [GCC Intel(R) C++ gcc 8.3.1 mode] [2023-06-12 16:37:29,083] multiqc [INFO ] Searching : /scratch/gencore/logs/html/H5NT3BGXT/merged [2023-06-12 16:37:29,083] multiqc [DEBUG ] Analysing modules: custom_content, conpair, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, goleft_indexcov, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, homer, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, mtnucratio, picard, prokka, samblaster, samtools, sexdeterrmine, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, interop, ivar, flash, seqyclean [2023-06-12 16:37:29,084] multiqc [DEBUG ] Using temporary directory for creating report: /state/partition1/job-34478530/tmpbj90vy8q [2023-06-12 16:37:29,187] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5NT3BGXT_n01_DEL2_AmpPoolIDT1-B_A_aa_fastqc.html [2023-06-12 16:37:29,190] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5NT3BGXT_n01_DEL2_AmpPoolIDT1-B_A_aa_fastqc.html [2023-06-12 16:37:29,235] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5NT3BGXT_n01_DEL2_C24AmpPoolHm-B_aa_a_fastqc.html [2023-06-12 16:37:29,237] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5NT3BGXT_n01_DEL2_C24AmpPoolHm-B_aa_a_fastqc.html [2023-06-12 16:37:29,292] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5NT3BGXT_n01_daplib_AmpPoolHm-input_C_aa_fastqc.html [2023-06-12 16:37:29,294] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5NT3BGXT_n01_daplib_AmpPoolHm-input_C_aa_fastqc.html [2023-06-12 16:37:29,335] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5NT3BGXT_n01_DEL2_ColAmpPoolHm-B_aa_a_fastqc.html [2023-06-12 16:37:29,337] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5NT3BGXT_n01_DEL2_ColAmpPoolHm-B_aa_a_fastqc.html [2023-06-12 16:37:29,379] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5NT3BGXT_n01_DEL2_AmpPoolIDT1-B_C_aa_fastqc.html [2023-06-12 16:37:29,381] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5NT3BGXT_n01_DEL2_AmpPoolIDT1-B_C_aa_fastqc.html [2023-06-12 16:37:29,423] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5NT3BGXT_n01_DEL2_ShaAmpPoolIDT1-B_aa_a_fastqc.html [2023-06-12 16:37:29,425] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5NT3BGXT_n01_DEL2_ShaAmpPoolIDT1-B_aa_a_fastqc.html [2023-06-12 16:37:29,469] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5NT3BGXT_n01_daplib_AmpPoolHm-input_A_aa_fastqc.html [2023-06-12 16:37:29,471] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5NT3BGXT_n01_daplib_AmpPoolHm-input_A_aa_fastqc.html [2023-06-12 16:37:29,512] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5NT3BGXT_n01_daplib_An1AmpPoolHm-input_aa_a_fastqc.html [2023-06-12 16:37:29,514] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5NT3BGXT_n01_daplib_An1AmpPoolHm-input_aa_a_fastqc.html [2023-06-12 16:37:29,556] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5NT3BGXT_n01_daplib_F1b-input_aa2_a_fastqc.html [2023-06-12 16:37:29,558] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5NT3BGXT_n01_daplib_F1b-input_aa2_a_fastqc.html [2023-06-12 16:37:29,599] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5NT3BGXT_n01_ColSPL9-F1b-B_aa2_a_fastqc.html [2023-06-12 16:37:29,600] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5NT3BGXT_n01_ColSPL9-F1b-B_aa2_a_fastqc.html [2023-06-12 16:37:29,641] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5NT3BGXT_n01_C24SPL9-F1b-B_aa2_a_fastqc.html [2023-06-12 16:37:29,643] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5NT3BGXT_n01_C24SPL9-F1b-B_aa2_a_fastqc.html [2023-06-12 16:37:29,682] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5NT3BGXT_n01_daplib_F1b-input_aa1_a_fastqc.html [2023-06-12 16:37:29,684] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: 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multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5NT3BGXT_n01_daplib_C24AmpPoolHm-input_aa_a_fastqc.html [2023-06-12 16:37:30,104] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5NT3BGXT_n01_daplib_C24AmpPoolHm-input_aa_a_fastqc.html [2023-06-12 16:37:30,146] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5NT3BGXT_n01_DEL2_EriAmpPoolHm-B_aa_a_fastqc.html [2023-06-12 16:37:30,148] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5NT3BGXT_n01_DEL2_EriAmpPoolHm-B_aa_a_fastqc.html [2023-06-12 16:37:30,190] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5NT3BGXT_n01_DEL2_AmpPoolIDT1-B_T_aa_fastqc.html [2023-06-12 16:37:30,191] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5NT3BGXT_n01_DEL2_AmpPoolIDT1-B_T_aa_fastqc.html [2023-06-12 16:37:30,233] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5NT3BGXT_n01_daplib_ColAmpPoolHm-input_aa_a_fastqc.html [2023-06-12 16:37:30,235] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5NT3BGXT_n01_daplib_ColAmpPoolHm-input_aa_a_fastqc.html [2023-06-12 16:37:30,277] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5NT3BGXT_n01_DEL2_AmpPoolIDT1-B_G_aa_fastqc.html [2023-06-12 16:37:30,279] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5NT3BGXT_n01_DEL2_AmpPoolIDT1-B_G_aa_fastqc.html [2023-06-12 16:37:30,319] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5NT3BGXT_n01_C24SPL9-F1b-B_aa1_a_fastqc.html [2023-06-12 16:37:30,321] multiqc [DEBUG ] File 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H5NT3BGXT_n01_DEL2_ShaAmpPoolHm-B_aa_a_fastqc.html [2023-06-12 16:37:30,452] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5NT3BGXT_n01_DEL2_ShaAmpPoolHm-B_aa_a_fastqc.html [2023-06-12 16:37:30,494] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5NT3BGXT_n01_DEL2_An1AmpPoolHm-B_aa_a_fastqc.html [2023-06-12 16:37:30,496] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5NT3BGXT_n01_DEL2_An1AmpPoolHm-B_aa_a_fastqc.html [2023-06-12 16:37:30,566] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5NT3BGXT_n01_DEL2_LerAmpPoolHm-B_aa_a_fastqc.html [2023-06-12 16:37:30,568] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5NT3BGXT_n01_DEL2_LerAmpPoolHm-B_aa_a_fastqc.html [2023-06-12 16:37:30,614] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5NT3BGXT_n01_ColSPL9-F1b-B_aa1_a_fastqc.html [2023-06-12 16:37:30,615] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5NT3BGXT_n01_ColSPL9-F1b-B_aa1_a_fastqc.html [2023-06-12 16:37:30,655] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5NT3BGXT_n01_daplib_ShaAmpPoolHm-input_aa_a_fastqc.html [2023-06-12 16:37:30,657] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5NT3BGXT_n01_daplib_ShaAmpPoolHm-input_aa_a_fastqc.html [2023-06-12 16:37:30,699] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5NT3BGXT_n01_undetermined_fastqc.html [2023-06-12 16:37:30,701] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5NT3BGXT_n01_undetermined_fastqc.html [2023-06-12 16:37:30,742] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5NT3BGXT_n01_daplib_EriAmpPoolHm-input_aa_a_fastqc.html [2023-06-12 16:37:30,744] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5NT3BGXT_n01_daplib_EriAmpPoolHm-input_aa_a_fastqc.html [2023-06-12 16:37:30,802] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5NT3BGXT_n01_DEL2_C24AmpPoolIDT1-B_aa_a_fastqc.html [2023-06-12 16:37:30,804] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5NT3BGXT_n01_DEL2_C24AmpPoolIDT1-B_aa_a_fastqc.html [2023-06-12 16:37:30,848] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5NT3BGXT_n01_DEL2_EriAmpPoolIDT1-B_aa_a_fastqc.html [2023-06-12 16:37:30,850] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5NT3BGXT_n01_DEL2_EriAmpPoolIDT1-B_aa_a_fastqc.html [2023-06-12 16:37:31,172] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.3.2 [2023-06-12 16:37:31,173] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.3.2 [2023-06-12 16:37:31,197] multiqc.modules.custom_content.custom_content [INFO ] demux_report: Found 37 samples (table) [2023-06-12 16:37:31,198] multiqc.modules.custom_content.custom_content [INFO ] run_stats: Found 1 samples (table) [2023-06-12 16:37:31,208] multiqc.modules.custom_content.custom_content [INFO ] undetermined_barcodes: Found 20 samples (table) [2023-06-12 16:37:31,212] multiqc [DEBUG ] No samples found: conpair [2023-06-12 16:37:31,217] multiqc [DEBUG ] No samples found: peddy [2023-06-12 16:37:31,221] multiqc [DEBUG ] No samples found: somalier [2023-06-12 16:37:31,225] multiqc [DEBUG ] No samples found: methylQA [2023-06-12 16:37:31,232] multiqc [DEBUG ] No samples found: mosdepth [2023-06-12 16:37:31,236] multiqc [DEBUG ] No samples found: phantompeakqualtools [2023-06-12 16:37:31,239] multiqc [DEBUG ] No samples found: qualimap [2023-06-12 16:37:31,243] multiqc [DEBUG ] No samples found: preseq [2023-06-12 16:37:31,247] multiqc [DEBUG ] No samples found: quast [2023-06-12 16:37:31,251] multiqc [DEBUG ] No samples found: qorts [2023-06-12 16:37:31,255] multiqc [DEBUG ] No samples found: rna_seqc [2023-06-12 16:37:31,260] multiqc [DEBUG ] No samples found: rockhopper [2023-06-12 16:37:31,264] multiqc [DEBUG ] No samples found: rsem [2023-06-12 16:37:31,273] multiqc [DEBUG ] No samples found: rseqc [2023-06-12 16:37:31,277] multiqc [DEBUG ] No samples found: busco [2023-06-12 16:37:31,281] multiqc [DEBUG ] No samples found: goleft_indexcov [2023-06-12 16:37:31,285] multiqc [DEBUG ] No samples found: disambiguate [2023-06-12 16:37:31,289] multiqc [DEBUG ] No samples found: supernova [2023-06-12 16:37:31,299] multiqc [DEBUG ] No samples found: deeptools [2023-06-12 16:37:31,303] multiqc [DEBUG ] No samples found: sargasso [2023-06-12 16:37:31,308] multiqc [DEBUG ] No samples found: verifybamid [2023-06-12 16:37:31,312] multiqc [DEBUG ] No samples found: mirtrace [2023-06-12 16:37:31,316] multiqc [DEBUG ] No samples found: happy [2023-06-12 16:37:31,320] multiqc [DEBUG ] No samples found: mirtop [2023-06-12 16:37:31,325] multiqc [DEBUG ] No samples found: homer [2023-06-12 16:37:31,329] multiqc [DEBUG ] No samples found: macs2 [2023-06-12 16:37:31,333] multiqc [DEBUG ] No samples found: theta2 [2023-06-12 16:37:31,337] multiqc [DEBUG ] No samples found: snpeff [2023-06-12 16:37:31,343] multiqc [DEBUG ] No samples found: gatk [2023-06-12 16:37:31,347] multiqc [DEBUG ] No samples found: htseq [2023-06-12 16:37:31,352] multiqc [DEBUG ] No samples found: bcftools [2023-06-12 16:37:31,356] multiqc [DEBUG ] No samples found: featureCounts [2023-06-12 16:37:31,362] multiqc [DEBUG ] No samples found: fgbio [2023-06-12 16:37:31,373] multiqc [DEBUG ] No samples found: dragen [2023-06-12 16:37:31,377] multiqc [DEBUG ] No samples found: dedup [2023-06-12 16:37:31,382] multiqc [DEBUG ] No samples found: damageprofiler [2023-06-12 16:37:31,400] multiqc [DEBUG ] No samples found: biobambam2 [2023-06-12 16:37:31,404] multiqc [DEBUG ] No samples found: mtnucratio [2023-06-12 16:37:31,406] multiqc [DEBUG ] No samples found: picard [2023-06-12 16:37:31,410] multiqc [DEBUG ] No samples found: prokka [2023-06-12 16:37:31,414] multiqc [DEBUG ] No samples found: samblaster [2023-06-12 16:37:31,422] multiqc [DEBUG ] No samples found: samtools [2023-06-12 16:37:31,426] multiqc [DEBUG ] No samples found: sexdeterrmine [2023-06-12 16:37:31,430] multiqc [DEBUG ] No samples found: bamtools [2023-06-12 16:37:31,434] multiqc [DEBUG ] No samples found: jellyfish [2023-06-12 16:37:31,440] multiqc [DEBUG ] No samples found: vcftools [2023-06-12 16:37:31,444] multiqc [DEBUG ] No samples found: longranger [2023-06-12 16:37:31,448] multiqc [DEBUG ] No samples found: stacks [2023-06-12 16:37:31,452] multiqc [DEBUG ] No samples found: varscan2 [2023-06-12 16:37:31,464] multiqc [DEBUG ] No samples found: bbmap [2023-06-12 16:37:31,469] multiqc [DEBUG ] No samples found: bismark [2023-06-12 16:37:31,473] multiqc [DEBUG ] No samples found: biscuit [2023-06-12 16:37:31,478] multiqc [DEBUG ] No samples found: hicexplorer [2023-06-12 16:37:31,482] multiqc [DEBUG ] No samples found: hicup [2023-06-12 16:37:31,486] multiqc [DEBUG ] No samples found: hicpro [2023-06-12 16:37:31,490] multiqc [DEBUG ] No samples found: salmon [2023-06-12 16:37:31,494] multiqc [DEBUG ] No samples found: kallisto [2023-06-12 16:37:31,498] multiqc [DEBUG ] No samples found: slamdunk [2023-06-12 16:37:31,502] multiqc [DEBUG ] No samples found: star [2023-06-12 16:37:31,506] multiqc [DEBUG ] No samples found: hisat2 [2023-06-12 16:37:31,510] multiqc [DEBUG ] No samples found: tophat [2023-06-12 16:37:31,514] multiqc [DEBUG ] No samples found: bowtie2 [2023-06-12 16:37:31,518] multiqc [DEBUG ] No samples found: bowtie1 [2023-06-12 16:37:31,522] multiqc [DEBUG ] No samples found: snpsplit [2023-06-12 16:37:31,526] multiqc [DEBUG ] No samples found: kat [2023-06-12 16:37:31,530] multiqc [DEBUG ] No samples found: leehom [2023-06-12 16:37:31,534] multiqc [DEBUG ] No samples found: adapterRemoval [2023-06-12 16:37:31,538] multiqc [DEBUG ] No samples found: clipandmerge [2023-06-12 16:37:31,542] multiqc [DEBUG ] No samples found: cutadapt [2023-06-12 16:37:31,545] multiqc [DEBUG ] No samples found: flexbar [2023-06-12 16:37:31,549] multiqc [DEBUG ] No samples found: kaiju [2023-06-12 16:37:31,553] multiqc [DEBUG ] No samples found: kraken [2023-06-12 16:37:31,557] multiqc [DEBUG ] No samples found: malt [2023-06-12 16:37:31,561] multiqc [DEBUG ] No samples found: trimmomatic [2023-06-12 16:37:31,566] multiqc [DEBUG ] No samples found: sickle [2023-06-12 16:37:31,570] multiqc [DEBUG ] No samples found: skewer [2023-06-12 16:37:31,579] multiqc [DEBUG ] No samples found: sortmerna [2023-06-12 16:37:31,583] multiqc [DEBUG ] No samples found: biobloomtools [2023-06-12 16:37:31,587] multiqc [DEBUG ] No samples found: fastq_screen [2023-06-12 16:37:31,591] multiqc [DEBUG ] No samples found: afterqc [2023-06-12 16:37:31,596] multiqc [DEBUG ] No samples found: fastp [2023-06-12 16:37:34,076] multiqc.modules.fastqc.fastqc [INFO ] Found 37 reports [2023-06-12 16:37:34,837] multiqc [DEBUG ] No samples found: pycoqc [2023-06-12 16:37:34,841] multiqc [DEBUG ] No samples found: minionqc [2023-06-12 16:37:34,846] multiqc [DEBUG ] No samples found: multivcfanalyzer [2023-06-12 16:37:34,850] multiqc [DEBUG ] No samples found: clusterflow [2023-06-12 16:37:34,855] multiqc [DEBUG ] No samples found: bcl2fastq [2023-06-12 16:37:34,859] multiqc [DEBUG ] No samples found: interop [2023-06-12 16:37:34,863] multiqc [DEBUG ] No samples found: ivar [2023-06-12 16:37:34,868] multiqc [DEBUG ] No samples found: flash [2023-06-12 16:37:34,872] multiqc [DEBUG ] No samples found: seqyclean [2023-06-12 16:37:34,872] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found. [2023-06-12 16:37:34,872] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found. [2023-06-12 16:37:34,872] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found. [2023-06-12 16:37:34,872] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Demultiplexing Report'. [2023-06-12 16:37:34,872] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Demultiplexing Report'. [2023-06-12 16:37:34,873] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Demultiplexing Report'. [2023-06-12 16:37:34,873] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Demultiplexing Report'. [2023-06-12 16:37:34,873] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Demultiplexing Report'. [2023-06-12 16:37:34,873] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Demultiplexing Report'. [2023-06-12 16:37:34,873] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module ' Barcodes of Undetermined Reads'. [2023-06-12 16:37:34,873] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module ' Barcodes of Undetermined Reads'. [2023-06-12 16:37:34,873] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module ' Barcodes of Undetermined Reads'. [2023-06-12 16:37:34,873] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module ' Barcodes of Undetermined Reads'. [2023-06-12 16:37:34,873] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module ' Barcodes of Undetermined Reads'. [2023-06-12 16:37:34,873] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module ' Barcodes of Undetermined Reads'. [2023-06-12 16:37:34,873] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module ' Barcodes of Undetermined Reads'. [2023-06-12 16:37:34,873] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Run Statistics'. [2023-06-12 16:37:34,873] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Run Statistics'. [2023-06-12 16:37:34,873] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'Run Statistics'. [2023-06-12 16:37:34,873] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Run Statistics'. [2023-06-12 16:37:34,873] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Run Statistics'. [2023-06-12 16:37:34,873] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Run Statistics'. [2023-06-12 16:37:34,873] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Run Statistics'. [2023-06-12 16:37:34,873] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'FastQC'. [2023-06-12 16:37:34,873] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'FastQC'. [2023-06-12 16:37:34,873] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'FastQC'. [2023-06-12 16:37:34,873] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'FastQC'. [2023-06-12 16:37:34,873] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'FastQC'. [2023-06-12 16:37:34,873] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'FastQC'. [2023-06-12 16:37:34,873] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'FastQC'. [2023-06-12 16:37:34,916] multiqc [INFO ] Compressing plot data [2023-06-12 16:37:35,539] multiqc [INFO ] Report : multiqc_report.html [2023-06-12 16:37:35,539] multiqc [INFO ] Data : multiqc_data [2023-06-12 16:37:35,539] multiqc [DEBUG ] Moving data file from '/state/partition1/job-34478530/tmpbj90vy8q/multiqc_data' to '/scratch/gencore/logs/html/H5NT3BGXT/merged/multiqc_data' [2023-06-12 16:37:35,656] multiqc [INFO ] MultiQC complete