FastQCFastQC Report
Mon 12 Jun 2023
H5NT3BGXT_n01_daplib_F1b-input_aa1_a.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH5NT3BGXT_n01_daplib_F1b-input_aa1_a.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69388254
Sequences flagged as poor quality0
Sequence length76
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCTGAAGCTATCTCGTAT3027150.436262598566034TruSeq Adapter, Index 19 (97% over 38bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCTGAAGCTATCTCGTTT875900.12623173945261687TruSeq Adapter, Index 19 (97% over 38bp)
CGGAAGAGCACACGTCTGAACTCCAGTCACCTGAAGCTATCTCGTATGCC785070.1131416276881675TruSeq Adapter, Index 19 (97% over 35bp)

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)