H5NLTBGXB_n01_JK05.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H5NLTBGXB_n01_JK05.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	24984654
Sequences flagged as poor quality	0
Sequence length	76
%GC	35

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CATTTTGACTGAACTGGAGAACAGTGTTCGAAATATATTTCAACTGTACT	3882840	15.540899625826318	No Hit
CATTTTGACTGAACTGGAGAACAGTGTTCGAAATATATTTCAACTGTACA	2796105	11.19128966124566	No Hit
CATTTTGACTGAACTGGAGAACAGTGTTCGAAATATATTTCAACTGTACC	2446663	9.792663128334697	No Hit
CATTTTGACTGAACTGGAGAACAGTGTTCGAAATATATTTCAACTGTACG	920513	3.6843135790473625	No Hit
AACGAGGTAAACTAATTTTGATCGCAATCGACGTCGTCAAGCTGGCAAAA	285572	1.1429896127438868	No Hit
AACGAGGTAAACTAATTTTGATCTAGTTTGGTTAAGCGCTTAATTTGAAG	285207	1.1415287159870213	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	41062	0.16434888391890476	No Hit
CATTTTGACTGAACTGGAGAACAGATCAAAATTAGTTTACCTCGTTAGAT	36140	0.14464879121399882	No Hit
AACGAGGTAAACTAATTTTGATCTGTTCTCCAGTTCAGTCAAAATGAGAT	33767	0.1351509610659407	No Hit
AACGAGGTAAACTAATTTTGATCAGGACAGTTTGAGATATTGAAGAAAAT	28915	0.11573104034180341	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AACGAGG	1285965	69.81528	1
ACGAGGT	1306570	68.82037	2
CGAGGTA	1317240	68.55944	3
CATTTTG	1107395	68.40242	1
GAGGTAA	1322775	68.26859	4
GGTAAAC	1325055	68.19444	6
AGGTAAA	1325715	68.12116	5
GTAAACT	1328470	68.022514	7
TTTGATC	1291735	67.99571	17
TAAACTA	1330105	67.976006	8
AACTAAT	1332495	67.85854	10
ACTAATT	1335920	67.70448	11
TTGATCT	394575	67.669426	18
AAACTAA	1338830	67.58922	9
CTAATTT	1339615	67.54491	12
TTGATCC	225005	67.46458	18
TGTACGC	10005	67.44555	45
CTGTACT	421640	67.3961	44
TTGATCA	450080	67.359985	18
TTGATCG	232745	67.35802	18