FastQCFastQC Report
Fri 2 Jun 2023
H5NKTDRX3_n02_SS23.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH5NKTDRX3_n02_SS23.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4280203
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG101910.23809618375577046No Hit
GTATATATATATACATGAGAAGAACGGCATAGTGCGTGTTTATGCTTAAA53120.12410626318424617No Hit
TATATATACAGGCAACACGCAGATATAGGTGCGACGTGAACAGTGAGCTG45290.10581273832105627No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)