FastQCFastQC Report
Fri 2 Jun 2023
H5NKTDRX3_n02_3149.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH5NKTDRX3_n02_3149.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19481214
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATATAGGTGCGACGTGAACAGTGAGCTGTATGTGCGCAGCTCGCGTTGC332460.17065671574677022No Hit
TATATATACAGGCAACACGCAGATATAGGTGCGACGTGAACAGTGAGCTG284640.1461099908866049No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG245200.12586484599984377No Hit
GTATGTGCGCAGCTCGCGTTGCATTTTCGGAAGCGCTCGTTTTCGGAAAC242070.12425816994772503No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)