H5LWJBCXY_l01n01_mb_biochip-dam_17.3510000007eeaf.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H5LWJBCXY_l01n01_mb_biochip-dam_17.3510000007eeaf.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8951172
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTAGAGATCTCGTATGCC	337898	3.7749023256395926	TruSeq Adapter, Index 3 (97% over 37bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATGCC	41070	43.04931	45
CGTATGC	41195	42.962376	44
CGTCTGA	46115	42.85187	16
ACGTAGA	40780	42.824825	32
CGTAGAG	40700	42.64365	33
GTCACGT	42780	42.626667	29
TCTCGTA	41100	42.558273	41
AGTCACG	43335	42.490902	28
TCACGTA	42225	42.371696	30
CACGTAG	41760	42.369385	31
ATCTCGT	41110	42.279736	40
CTCGTAT	41850	42.278976	42
ACGTCTG	46855	42.242325	15
TCGTATG	42090	42.1985	43
ACACGTC	47000	42.174232	13
CACACGT	47410	41.785786	12
TCTGAAC	47345	41.75286	18
GCACACG	47675	41.591274	11
GTCTGAA	47795	41.364452	17
CACGTCT	48135	41.179783	14