Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content H5L3LBGYW_n01_WT_25_2 H5L3LBGYW_n01_WT_25_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 1202934.0 0.0 15.0 36.0 59.71496772719417 15.0 pass warn pass warn fail fail pass pass warn fail pass H5L3LBGYW_n01_WT_26_2 H5L3LBGYW_n01_WT_26_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 6195078.0 0.0 15.0 40.0 51.07782157049603 15.0 pass warn pass warn fail fail pass pass warn fail pass H5L3LBGYW_n01_early_L4_mid_L4_herms H5L3LBGYW_n01_early_L4_mid_L4_herms.fastq.gz Conventional base calls Sanger / Illumina 1.9 9877976.0 0.0 15.0 40.0 55.186160641681425 15.0 pass warn pass warn fail fail pass pass warn fail pass H5L3LBGYW_n01_early_L4_mid_L4_males H5L3LBGYW_n01_early_L4_mid_L4_males.fastq.gz Conventional base calls Sanger / Illumina 1.9 7075331.0 0.0 15.0 41.0 55.58859312205868 15.0 pass warn pass warn fail fail pass pass warn fail pass H5L3LBGYW_n01_late_L3_early_L4_herms H5L3LBGYW_n01_late_L3_early_L4_herms.fastq.gz Conventional base calls Sanger / Illumina 1.9 23011014.0 0.0 15.0 42.0 45.80775274199994 15.0 pass warn pass warn fail fail pass pass fail fail pass H5L3LBGYW_n01_late_L3_early_L4_males H5L3LBGYW_n01_late_L3_early_L4_males.fastq.gz Conventional base calls Sanger / Illumina 1.9 1060232.0 0.0 15.0 41.0 74.63330451238663 15.0 pass warn pass warn fail warn pass pass pass fail pass H5L3LBGYW_n01_late_L4_herms H5L3LBGYW_n01_late_L4_herms.fastq.gz Conventional base calls Sanger / Illumina 1.9 15197264.0 0.0 15.0 36.0 32.31143622244517 15.0 pass warn pass warn fail fail pass pass fail fail pass H5L3LBGYW_n01_late_L4_males H5L3LBGYW_n01_late_L4_males.fastq.gz Conventional base calls Sanger / Illumina 1.9 20721414.0 0.0 15.0 38.0 27.61781888421546 15.0 pass warn pass warn fail fail pass pass fail fail pass H5L3LBGYW_n01_mid_L4_herms H5L3LBGYW_n01_mid_L4_herms.fastq.gz Conventional base calls Sanger / Illumina 1.9 29347181.0 0.0 15.0 36.0 27.72211308606254 15.0 pass warn pass warn fail fail pass pass fail fail pass H5L3LBGYW_n01_mid_L4_males H5L3LBGYW_n01_mid_L4_males.fastq.gz Conventional base calls Sanger / Illumina 1.9 20241520.0 0.0 15.0 36.0 33.78203586233378 15.0 pass warn pass warn fail fail pass pass fail fail pass H5L3LBGYW_n01_mid_L4_males_2 H5L3LBGYW_n01_mid_L4_males_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 12874158.0 0.0 15.0 34.0 37.1122777034467 15.0 pass warn pass warn fail fail pass pass fail fail pass H5L3LBGYW_n01_undetermined H5L3LBGYW_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 91287458.0 0.0 15.0 37.0 29.138247665760886 15.0 pass warn pass warn fail fail pass pass fail fail pass H5L3LBGYW_n02_WT_25_2 H5L3LBGYW_n02_WT_25_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 1202934.0 0.0 36.0 31.0 99.67790649918052 36.0 pass fail fail fail fail warn fail pass pass warn pass H5L3LBGYW_n02_WT_26_2 H5L3LBGYW_n02_WT_26_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 6195078.0 0.0 36.0 34.0 99.65222356094864 36.0 pass fail fail fail fail warn fail pass pass pass pass H5L3LBGYW_n02_early_L4_mid_L4_herms H5L3LBGYW_n02_early_L4_mid_L4_herms.fastq.gz Conventional base calls Sanger / Illumina 1.9 9877976.0 0.0 36.0 33.0 99.64312807113498 36.0 pass fail fail fail fail fail fail pass pass pass pass H5L3LBGYW_n02_early_L4_mid_L4_males H5L3LBGYW_n02_early_L4_mid_L4_males.fastq.gz Conventional base calls Sanger / Illumina 1.9 7075331.0 0.0 36.0 36.0 99.71761516366963 36.0 pass fail fail fail fail warn fail pass pass pass pass H5L3LBGYW_n02_late_L3_early_L4_herms H5L3LBGYW_n02_late_L3_early_L4_herms.fastq.gz Conventional base calls Sanger / Illumina 1.9 23011014.0 0.0 36.0 36.0 99.47705671955957 36.0 pass fail fail fail fail warn fail pass pass pass pass H5L3LBGYW_n02_late_L3_early_L4_males H5L3LBGYW_n02_late_L3_early_L4_males.fastq.gz Conventional base calls Sanger / Illumina 1.9 1060232.0 0.0 36.0 33.0 99.95178113974606 36.0 pass fail fail fail fail warn fail pass pass pass pass H5L3LBGYW_n02_late_L4_herms H5L3LBGYW_n02_late_L4_herms.fastq.gz Conventional base calls Sanger / Illumina 1.9 15197264.0 0.0 36.0 33.0 98.6524719180588 36.0 pass fail fail fail fail fail fail pass pass pass pass H5L3LBGYW_n02_late_L4_males H5L3LBGYW_n02_late_L4_males.fastq.gz Conventional base calls Sanger / Illumina 1.9 20721414.0 0.0 36.0 35.0 98.33452294041051 36.0 pass fail fail fail fail fail fail pass pass pass pass H5L3LBGYW_n02_mid_L4_herms H5L3LBGYW_n02_mid_L4_herms.fastq.gz Conventional base calls Sanger / Illumina 1.9 29347181.0 0.0 36.0 33.0 98.18854864037 36.0 pass fail fail fail fail fail fail pass pass pass pass H5L3LBGYW_n02_mid_L4_males H5L3LBGYW_n02_mid_L4_males.fastq.gz Conventional base calls Sanger / Illumina 1.9 20241520.0 0.0 36.0 32.0 99.04859219615591 36.0 pass fail fail fail fail fail fail pass pass pass pass H5L3LBGYW_n02_mid_L4_males_2 H5L3LBGYW_n02_mid_L4_males_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 12874158.0 0.0 36.0 33.0 99.19533510702881 36.0 pass fail fail fail fail fail fail pass pass pass pass H5L3LBGYW_n02_undetermined H5L3LBGYW_n02_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 91287458.0 0.0 36.0 33.0 99.83922559764376 36.0 pass fail fail fail fail fail fail pass pass pass pass