[2024-11-22 04:01:50,574] multiqc [DEBUG ] No MultiQC config found: /share/apps/multiqc/1.9/lib/python3.8/site-packages/multiqc_config.yaml [2024-11-22 04:01:50,574] multiqc [DEBUG ] No MultiQC config found: /home/gencore/.multiqc_config.yaml [2024-11-22 04:01:50,574] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml [2024-11-22 04:01:50,577] multiqc [DEBUG ] Loading config settings from: /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml [2024-11-22 04:01:50,577] multiqc [DEBUG ] New config 'report_section_order': {'general_stats': {'order': 1000}, 'demux_report': {'order': 900}, 'demux_report-1': {'order': 900}, 'demux_report-2': {'order': 900}, 'undetermined_barcodes': {'order': 800}, 'run_stats': {'order': 700}, 'fastqc': {'order': 500}} [2024-11-22 04:01:50,577] multiqc [DEBUG ] Command used: /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml . [2024-11-22 04:01:50,607] multiqc [DEBUG ] Could not connect to multiqc.info for version check: [2024-11-22 04:01:50,607] multiqc [INFO ] This is MultiQC v1.9 [2024-11-22 04:01:50,607] multiqc [DEBUG ] Command : /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml . [2024-11-22 04:01:50,607] multiqc [DEBUG ] Working dir : /scratch/gencore/GENEFLOW/work/nf/8c/7dbaf497869e2a069c9a9a33e8187a/merged [2024-11-22 04:01:50,607] multiqc [INFO ] Template : default [2024-11-22 04:01:50,607] multiqc [DEBUG ] Running Python 3.8.6 (default, Oct 11 2020, 20:34:31) [GCC Intel(R) C++ gcc 8.3.1 mode] [2024-11-22 04:01:50,607] multiqc [INFO ] Searching : /scratch/gencore/GENEFLOW/work/nf/8c/7dbaf497869e2a069c9a9a33e8187a/merged [2024-11-22 04:01:50,608] multiqc [DEBUG ] Analysing modules: custom_content, conpair, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, goleft_indexcov, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, homer, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, mtnucratio, picard, prokka, samblaster, samtools, sexdeterrmine, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, interop, ivar, flash, seqyclean [2024-11-22 04:01:50,608] multiqc [DEBUG ] Using temporary directory for creating report: /state/partition1/job-53877268/tmpc_9msj8r [2024-11-22 04:01:50,726] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5L3LBGYW_n02_early_L4_mid_L4_herms_fastqc.html [2024-11-22 04:01:50,729] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5L3LBGYW_n02_early_L4_mid_L4_herms_fastqc.html [2024-11-22 04:01:50,782] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5L3LBGYW_n02_WT_25_2_fastqc.html [2024-11-22 04:01:50,784] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5L3LBGYW_n02_WT_25_2_fastqc.html [2024-11-22 04:01:50,833] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: undetermined_barcodes.txt [2024-11-22 04:01:50,835] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: undetermined_barcodes.txt [2024-11-22 04:01:51,016] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5L3LBGYW_n02_mid_L4_males_fastqc.html [2024-11-22 04:01:51,018] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5L3LBGYW_n02_mid_L4_males_fastqc.html [2024-11-22 04:01:51,069] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5L3LBGYW_n02_late_L3_early_L4_herms_fastqc.html [2024-11-22 04:01:51,071] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5L3LBGYW_n02_late_L3_early_L4_herms_fastqc.html [2024-11-22 04:01:51,122] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5L3LBGYW_n01_early_L4_mid_L4_herms_fastqc.html [2024-11-22 04:01:51,124] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5L3LBGYW_n01_early_L4_mid_L4_herms_fastqc.html [2024-11-22 04:01:51,172] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5L3LBGYW_n02_late_L4_herms_fastqc.html [2024-11-22 04:01:51,174] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5L3LBGYW_n02_late_L4_herms_fastqc.html [2024-11-22 04:01:51,225] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5L3LBGYW_n02_mid_L4_males_2_fastqc.html [2024-11-22 04:01:51,227] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5L3LBGYW_n02_mid_L4_males_2_fastqc.html [2024-11-22 04:01:51,278] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5L3LBGYW_n01_undetermined_fastqc.html [2024-11-22 04:01:51,280] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5L3LBGYW_n01_undetermined_fastqc.html [2024-11-22 04:01:51,329] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5L3LBGYW_n01_late_L3_early_L4_males_fastqc.html [2024-11-22 04:01:51,331] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5L3LBGYW_n01_late_L3_early_L4_males_fastqc.html [2024-11-22 04:01:51,379] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5L3LBGYW_n02_early_L4_mid_L4_males_fastqc.html [2024-11-22 04:01:51,381] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5L3LBGYW_n02_early_L4_mid_L4_males_fastqc.html [2024-11-22 04:01:51,431] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5L3LBGYW_n01_late_L3_early_L4_herms_fastqc.html [2024-11-22 04:01:51,433] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5L3LBGYW_n01_late_L3_early_L4_herms_fastqc.html [2024-11-22 04:01:51,483] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5L3LBGYW_n02_late_L4_males_fastqc.html [2024-11-22 04:01:51,484] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5L3LBGYW_n02_late_L4_males_fastqc.html [2024-11-22 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04:01:51,694] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5L3LBGYW_n01_late_L4_males_fastqc.html [2024-11-22 04:01:51,696] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5L3LBGYW_n01_late_L4_males_fastqc.html [2024-11-22 04:01:51,747] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5L3LBGYW_n02_undetermined_fastqc.html [2024-11-22 04:01:51,749] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5L3LBGYW_n02_undetermined_fastqc.html [2024-11-22 04:01:51,800] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5L3LBGYW_n01_WT_26_2_fastqc.html [2024-11-22 04:01:51,802] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5L3LBGYW_n01_WT_26_2_fastqc.html [2024-11-22 04:01:51,851] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5L3LBGYW_n01_mid_L4_herms_fastqc.html [2024-11-22 04:01:51,853] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5L3LBGYW_n01_mid_L4_herms_fastqc.html [2024-11-22 04:01:51,903] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5L3LBGYW_n01_early_L4_mid_L4_males_fastqc.html [2024-11-22 04:01:51,905] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5L3LBGYW_n01_early_L4_mid_L4_males_fastqc.html [2024-11-22 04:01:51,954] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5L3LBGYW_n01_mid_L4_males_fastqc.html [2024-11-22 04:01:51,956] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5L3LBGYW_n01_mid_L4_males_fastqc.html [2024-11-22 04:01:52,007] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5L3LBGYW_n01_late_L4_herms_fastqc.html [2024-11-22 04:01:52,009] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5L3LBGYW_n01_late_L4_herms_fastqc.html [2024-11-22 04:01:52,059] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5L3LBGYW_n01_mid_L4_males_2_fastqc.html [2024-11-22 04:01:52,061] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5L3LBGYW_n01_mid_L4_males_2_fastqc.html [2024-11-22 04:01:52,110] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5L3LBGYW_n02_mid_L4_herms_fastqc.html [2024-11-22 04:01:52,112] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5L3LBGYW_n02_mid_L4_herms_fastqc.html [2024-11-22 04:01:52,670] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.3.2 [2024-11-22 04:01:52,672] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.3.2 [2024-11-22 04:01:52,685] multiqc.modules.custom_content.custom_content [INFO ] demux_report: Found 12 samples (table) [2024-11-22 04:01:52,687] multiqc.modules.custom_content.custom_content [INFO ] run_stats: Found 1 samples (table) [2024-11-22 04:01:52,696] multiqc.modules.custom_content.custom_content [INFO ] undetermined_barcodes: Found 20 samples (table) [2024-11-22 04:01:52,703] multiqc [DEBUG ] No samples found: conpair [2024-11-22 04:01:52,709] multiqc [DEBUG ] No samples found: peddy [2024-11-22 04:01:52,715] multiqc [DEBUG ] No samples found: somalier [2024-11-22 04:01:52,722] multiqc [DEBUG ] No samples found: methylQA [2024-11-22 04:01:52,733] multiqc [DEBUG ] No samples found: mosdepth [2024-11-22 04:01:52,738] multiqc [DEBUG ] No samples found: phantompeakqualtools [2024-11-22 04:01:52,742] multiqc [DEBUG ] No samples found: qualimap [2024-11-22 04:01:52,748] multiqc [DEBUG ] No samples found: preseq [2024-11-22 04:01:52,754] multiqc [DEBUG ] No samples found: quast [2024-11-22 04:01:52,761] multiqc [DEBUG ] No samples found: qorts [2024-11-22 04:01:52,766] multiqc [DEBUG ] No samples found: rna_seqc [2024-11-22 04:01:52,772] multiqc [DEBUG ] No samples found: rockhopper [2024-11-22 04:01:52,778] multiqc [DEBUG ] No samples found: rsem [2024-11-22 04:01:52,793] multiqc [DEBUG ] No samples found: rseqc [2024-11-22 04:01:52,799] multiqc [DEBUG ] No samples found: busco [2024-11-22 04:01:52,805] multiqc [DEBUG ] No samples found: goleft_indexcov [2024-11-22 04:01:52,813] multiqc [DEBUG ] No samples found: disambiguate [2024-11-22 04:01:52,819] multiqc [DEBUG ] No samples found: supernova [2024-11-22 04:01:52,837] multiqc [DEBUG ] No samples found: deeptools [2024-11-22 04:01:52,844] multiqc [DEBUG ] No samples found: sargasso [2024-11-22 04:01:52,850] multiqc [DEBUG ] No samples found: verifybamid [2024-11-22 04:01:52,857] multiqc [DEBUG ] No samples found: mirtrace [2024-11-22 04:01:52,863] multiqc [DEBUG ] No samples found: happy [2024-11-22 04:01:52,869] multiqc [DEBUG ] No samples found: mirtop [2024-11-22 04:01:52,877] multiqc [DEBUG ] No samples found: homer [2024-11-22 04:01:52,883] multiqc [DEBUG ] No samples found: macs2 [2024-11-22 04:01:52,889] multiqc [DEBUG ] No samples found: theta2 [2024-11-22 04:01:52,895] multiqc [DEBUG ] No samples found: snpeff [2024-11-22 04:01:52,904] multiqc [DEBUG ] No samples found: gatk [2024-11-22 04:01:52,909] multiqc [DEBUG ] No samples found: htseq [2024-11-22 04:01:52,917] multiqc [DEBUG ] No samples found: bcftools [2024-11-22 04:01:52,923] multiqc [DEBUG ] No samples found: featureCounts [2024-11-22 04:01:52,931] multiqc [DEBUG ] No samples found: fgbio [2024-11-22 04:01:52,948] multiqc [DEBUG ] No samples found: dragen [2024-11-22 04:01:52,954] multiqc [DEBUG ] No samples found: dedup [2024-11-22 04:01:52,960] multiqc [DEBUG ] No samples found: damageprofiler [2024-11-22 04:01:52,988] multiqc [DEBUG ] No samples found: biobambam2 [2024-11-22 04:01:52,993] multiqc [DEBUG ] No samples found: mtnucratio [2024-11-22 04:01:52,996] multiqc [DEBUG ] No samples found: picard [2024-11-22 04:01:53,002] multiqc [DEBUG ] No samples found: prokka [2024-11-22 04:01:53,008] multiqc [DEBUG ] No samples found: samblaster [2024-11-22 04:01:53,019] multiqc [DEBUG ] No samples found: samtools [2024-11-22 04:01:53,025] multiqc [DEBUG ] No samples found: sexdeterrmine [2024-11-22 04:01:53,032] multiqc [DEBUG ] No samples found: bamtools [2024-11-22 04:01:53,038] multiqc [DEBUG ] No samples found: jellyfish [2024-11-22 04:01:53,049] multiqc [DEBUG ] No samples found: vcftools [2024-11-22 04:01:53,055] multiqc [DEBUG ] No samples found: longranger [2024-11-22 04:01:53,061] multiqc [DEBUG ] No samples found: stacks [2024-11-22 04:01:53,067] multiqc [DEBUG ] No samples found: varscan2 [2024-11-22 04:01:53,085] multiqc [DEBUG ] No samples found: bbmap [2024-11-22 04:01:53,091] multiqc [DEBUG ] No samples found: bismark [2024-11-22 04:01:53,097] multiqc [DEBUG ] No samples found: biscuit [2024-11-22 04:01:53,104] multiqc [DEBUG ] No samples found: hicexplorer [2024-11-22 04:01:53,110] multiqc [DEBUG ] No samples found: hicup [2024-11-22 04:01:53,115] multiqc [DEBUG ] No samples found: hicpro [2024-11-22 04:01:53,121] multiqc [DEBUG ] No samples found: salmon [2024-11-22 04:01:53,126] multiqc [DEBUG ] No samples found: kallisto [2024-11-22 04:01:53,133] multiqc [DEBUG ] No samples found: slamdunk [2024-11-22 04:01:53,138] multiqc [DEBUG ] No samples found: star [2024-11-22 04:01:53,144] multiqc [DEBUG ] No samples found: hisat2 [2024-11-22 04:01:53,150] multiqc [DEBUG ] No samples found: tophat [2024-11-22 04:01:53,155] multiqc [DEBUG ] No samples found: bowtie2 [2024-11-22 04:01:53,161] multiqc [DEBUG ] No samples found: bowtie1 [2024-11-22 04:01:53,166] multiqc [DEBUG ] No samples found: snpsplit [2024-11-22 04:01:53,172] multiqc [DEBUG ] No samples found: kat [2024-11-22 04:01:53,177] multiqc [DEBUG ] No samples found: leehom [2024-11-22 04:01:53,183] multiqc [DEBUG ] No samples found: adapterRemoval [2024-11-22 04:01:53,189] multiqc [DEBUG ] No samples found: clipandmerge [2024-11-22 04:01:53,195] multiqc [DEBUG ] No samples found: cutadapt [2024-11-22 04:01:53,201] multiqc [DEBUG ] No samples found: flexbar [2024-11-22 04:01:53,207] multiqc [DEBUG ] No samples found: kaiju [2024-11-22 04:01:53,212] multiqc [DEBUG ] No samples found: kraken [2024-11-22 04:01:53,218] multiqc [DEBUG ] No samples found: malt [2024-11-22 04:01:53,223] multiqc [DEBUG ] No samples found: trimmomatic [2024-11-22 04:01:53,229] multiqc [DEBUG ] No samples found: sickle [2024-11-22 04:01:53,234] multiqc [DEBUG ] No samples found: skewer [2024-11-22 04:01:53,240] multiqc [DEBUG ] No samples found: sortmerna [2024-11-22 04:01:53,245] multiqc [DEBUG ] No samples found: biobloomtools [2024-11-22 04:01:53,251] multiqc [DEBUG ] No samples found: fastq_screen [2024-11-22 04:01:53,257] multiqc [DEBUG ] No samples found: afterqc [2024-11-22 04:01:53,263] multiqc [DEBUG ] No samples found: fastp [2024-11-22 04:01:54,135] multiqc.modules.fastqc.fastqc [INFO ] Found 24 reports [2024-11-22 04:01:54,262] multiqc [DEBUG ] No samples found: pycoqc [2024-11-22 04:01:54,267] multiqc [DEBUG ] No samples found: minionqc [2024-11-22 04:01:54,273] multiqc [DEBUG ] No samples found: multivcfanalyzer [2024-11-22 04:01:54,279] multiqc [DEBUG ] No samples found: clusterflow [2024-11-22 04:01:54,284] multiqc [DEBUG ] No samples found: bcl2fastq [2024-11-22 04:01:54,292] multiqc [DEBUG ] No samples found: interop [2024-11-22 04:01:54,297] multiqc [DEBUG ] No samples found: ivar [2024-11-22 04:01:54,302] multiqc [DEBUG ] No samples found: flash [2024-11-22 04:01:54,308] multiqc [DEBUG ] No samples found: seqyclean [2024-11-22 04:01:54,308] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found. [2024-11-22 04:01:54,308] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found. [2024-11-22 04:01:54,308] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found. [2024-11-22 04:01:54,308] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Demultiplexing Report'. [2024-11-22 04:01:54,308] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Demultiplexing Report'. [2024-11-22 04:01:54,308] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Demultiplexing Report'. [2024-11-22 04:01:54,308] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Demultiplexing Report'. [2024-11-22 04:01:54,308] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Demultiplexing Report'. [2024-11-22 04:01:54,308] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Demultiplexing Report'. [2024-11-22 04:01:54,308] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module ' Barcodes of Undetermined Reads'. [2024-11-22 04:01:54,308] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module ' Barcodes of Undetermined Reads'. [2024-11-22 04:01:54,308] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module ' Barcodes of Undetermined Reads'. [2024-11-22 04:01:54,308] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module ' Barcodes of Undetermined Reads'. [2024-11-22 04:01:54,308] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module ' Barcodes of Undetermined Reads'. [2024-11-22 04:01:54,309] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module ' Barcodes of Undetermined Reads'. [2024-11-22 04:01:54,309] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module ' Barcodes of Undetermined Reads'. [2024-11-22 04:01:54,309] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Run Statistics'. [2024-11-22 04:01:54,309] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Run Statistics'. [2024-11-22 04:01:54,309] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'Run Statistics'. [2024-11-22 04:01:54,309] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Run Statistics'. [2024-11-22 04:01:54,309] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Run Statistics'. [2024-11-22 04:01:54,309] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Run Statistics'. [2024-11-22 04:01:54,309] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Run Statistics'. [2024-11-22 04:01:54,309] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'FastQC'. [2024-11-22 04:01:54,309] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'FastQC'. [2024-11-22 04:01:54,309] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'FastQC'. [2024-11-22 04:01:54,309] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'FastQC'. [2024-11-22 04:01:54,309] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'FastQC'. [2024-11-22 04:01:54,309] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'FastQC'. [2024-11-22 04:01:54,309] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'FastQC'. [2024-11-22 04:01:54,338] multiqc [INFO ] Compressing plot data [2024-11-22 04:01:54,702] multiqc [INFO ] Report : multiqc_report.html [2024-11-22 04:01:54,703] multiqc [INFO ] Data : multiqc_data [2024-11-22 04:01:54,703] multiqc [DEBUG ] Moving data file from '/state/partition1/job-53877268/tmpc_9msj8r/multiqc_data' to '/scratch/gencore/GENEFLOW/work/nf/8c/7dbaf497869e2a069c9a9a33e8187a/merged/multiqc_data' [2024-11-22 04:01:54,842] multiqc [INFO ] MultiQC complete