FastQCFastQC Report
Fri 22 Nov 2024
H5L3LBGYW_n01_undetermined.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH5L3LBGYW_n01_undetermined.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences91287458
Sequences flagged as poor quality0
Sequence length15
%GC37

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAGTATGCAGCGCG47597565.214030606482655No Hit
AAAAAAAAAAAAAAA40509424.437566878026114No Hit
CAAAAAAAAAAAAAA37585854.117307111344912No Hit
CCAAAAAAAAAAAAA16640441.8228615808318378No Hit
ACAAAAAAAAAAAAA6871750.7527594864126899No Hit
TAAAAAAAAAAAAAA6813040.7463281538631518No Hit
CTAAAAAAAAAAAAA4431710.48546756554443654No Hit
GAAAAAAAAAAAAAA4384480.4802937989575742No Hit
CCCAAAAAAAAAAAA4031070.4415798279759307No Hit
ATAAAAAAAAAAAAA3909610.4282746048203029No Hit
CAAGTATGCCGCGCG3717530.40723337920089747No Hit
CCAGTATGCAGCGCG3645000.3992881475569185No Hit
CTAGTATGCAGCGCG3278310.3591194312804723No Hit
ACCAAAAAAAAAAAA2644420.2896805385905257No Hit
CAAGTATGCAGCGCC2579850.2826072777708412No Hit
AAGTATGCAGCGCGC2530390.2771892279002883No Hit
GCAAAAAAAAAAAAA2464450.26996589170004054No Hit
TCAAAAAAAAAAAAA2065730.22628847875247002No Hit
AATAAAAAAAAAAAA2014500.22067653587199237No Hit
AAAGTATGCAGCGCG1864210.2042131570801325No Hit
CACAAAAAAAAAAAA1813490.19865708167709084No Hit
AACAAAAAAAAAAAA1806020.19783878744876432No Hit
TCCAAAAAAAAAAAA1770860.19398721782788605No Hit
GAAGTATGCAGCGCG1697530.18595435092518406No Hit
GCCAAAAAAAAAAAA1449190.15875017573607977No Hit
TTAAAAAAAAAAAAA1332170.1459313282663649No Hit
CATAAAAAAAAAAAA1305080.14296377931785545No Hit
CAAGGATGCAGCGCG1243170.13618190573342506No Hit
GTAAAAAAAAAAAAA1169330.12809317135328713No Hit
CAAGTATGCAGCGGG1117210.12238373424748009No Hit
CATGTATGCAGCGCG1114970.12213835552305552No Hit
AAAATAAAAAAAAAA1114230.1220572929087367No Hit
CAAATAAAAAAAAAA1106140.1211710813548998No Hit
AAAACAAAAAAAAAA1104490.12099033363378352No Hit
CCTAAAAAAAAAAAA1064000.11655489410166289No Hit
CAAGTCTGCAGCGCG1037390.1136399263083873No Hit
ATCAAAAAAAAAAAA995490.1090500296327673No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)