H5K5JAFXY_n02_1g_4.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H5K5JAFXY_n02_1g_4.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	19361664
Sequences flagged as poor quality	0
Sequence length	76
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTTTTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAG	237951	1.2289801124531445	No Hit
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT	102168	0.5276819182483489	No Hit
TTTTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGA	52028	0.26871657312098796	No Hit
GTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCTGT	39107	0.2019816065396032	No Hit
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTGATAGTCCTACAGA	34121	0.17622968769626413	No Hit
ACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCTGTAG	20227	0.10446932660333327	No Hit
TTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGT	20051	0.10356031382426634	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCTTAG	51370	45.36292	9
TTCCACC	52410	45.228638	5
TCCACCT	52515	45.058807	6
CACCTTA	52870	44.539303	8
TTTCCAC	54190	43.91703	4
CCACCTT	54220	43.57213	7
CCTTAGA	54020	42.995056	10
TTGTACT	26625	42.563374	1
CTTAGAG	54265	42.54295	11
TGTACTC	27530	41.0879	2
TAGAGTA	56970	40.59075	13
ACTCTAG	27870	40.14692	5
TTAGAGT	58565	39.521027	12
AGAGTAC	58540	39.45339	14
TTTTCCA	62650	38.188053	3
AGTACAA	61680	37.785454	16
GAGTACA	61290	37.694588	15
CTCTAGT	30060	37.24581	6
TACTCTA	30370	37.24515	4
GTACTCT	30755	36.69953	3