FastQCFastQC Report
Tue 19 Oct 2021
H5HCLBGXK_n01_lncHAP_D7_R2__lncHAP_D14_R1__lncHAP_D14_R2_.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH5HCLBGXK_n01_lncHAP_D7_R2__lncHAP_D14_R1__lncHAP_D14_R2_.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30746991
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCGATCGTTACCATCTAGTGGAAAGGACGATTCACCGAACCCCTACCAAC27791289.03869910392207No Hit
ATCGATACCTTGGTTCTTGTGGAAAGGACGATACACCGAACCCCTACCAA22805477.417138802297759No Hit
ATCGATACCTTGGTTCTTGTGGAAAGGACGATACACCGAACCCCTTCCAA18028125.863377004923832No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGATTCACCGAACCCCTACCAAC16808765.466798360854238No Hit
ATCGATACCTTGGTTCATGTGGAAAGGACGATACACCGAACCCCTACCAA10876593.537448591310935No Hit
CGATCATGATCGTCTTCTGGAAAGGACGAAACACCGAACCCCTACCAACT10141583.2983975570162296No Hit
ATCGATACCTTGGTTCATGTGGAAAGGACGATACACCGAACCCCTTCCAA9778323.180252662772757No Hit
CGATCATGATCGTCTTCTGGAAAGGACGAATCACCGAACCCCTACCAACT8107542.6368564000295183No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAATCACCGAACCCCTACCAACT8018632.6079397492912397No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACT7865712.558204801243803No Hit
TCGATCGTTACCATCTAGTGGAAAGGACGAATCACCGAACCCCTACCAAC7275832.366355133743006No Hit
TCGATCGTTACCATCTAGTGGAAAGGACGATTCACCGAAACAAGACGGGT7017502.2823371561789574No Hit
TCGATCGTTACCATCTAGTGGAAAGGACGAAACACCGAACCCCTACCAAC5300691.7239703228195564No Hit
TCGATCGTTACCATCTAGTGGAAAGGACGATTCACCGTACCCCTACCAAC5275831.7158849787935346No Hit
TCGATCCTTACCATCTAGTGGAAAGGACGATTCACCGAACCCCTACCAAC4979681.6195666105993916No Hit
CGATCATGATCGTCTTCTGGAAAGGACGAATGACCGAACCCCTACCAACT4410241.4343647480821782No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAATGACCGAACCCCTACCAACT4384611.4260289730465008No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGATTCACCGAAACAAGACGGGT4336811.4104827363432084No Hit
ATCGATACCTTGGTTCTTGTGGAAAGGACGATACACCGTACCCCTACCAA4178931.359134622311497No Hit
ATCGATACCTTGGTTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAA3728711.2127072857308216No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAATCACCGAACCCCTACCAAC3526531.1469512577669796No Hit
ATCGATACCTTGGTTCTTGTGGAAAGGACGATACACCGTACCCCTTCCAA3507651.1408108195042566No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGATTCACCGTACCCCTACCAAC3299501.0731131381278902No Hit
TCGATCGTTACCATCTAGTGGAAAGGACGATTCACCGAACCCCTAGCAAC3223161.048284692313469No Hit
TCGATCCTTACCATCTTGTGGAAAGGACGATTCACCGAACCCCTACCAAC2478350.8060463542595111No Hit
TCGATCGTTACCATCTAGTGGAAAGGACGATACACCGAACCCCTACCAAC2415290.7855370302739542No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACACCGAACCCCTACCAAC2240960.7288387992177836No Hit
ATCGATTCCTTGGTTCTTGTGGAAAGGACGATACACCGAACCCCTACCAA1976890.6429539723090302No Hit
ATCGATACCTTGGTTCATGTGGAAAGGACGATACACCGTACCCCTACCAA1975040.6423522874157019No Hit
ATCGATACCTTGGTTCATGTGGAAAGGACGATACACCGTACCCCTTCCAA1898290.617390495219516No Hit
ATCGATACCTTGGTTCATGTGGAAAGGACGAAACACCGAACCCCTACCAA1805330.5871566424174645No Hit
CGATCATGATCGTCTTCTGGAAAGGACGAAACACCGTACCCCTACCAACT1797520.5846165564623867No Hit
TCGATCGTTACCATCTAGTGGAAAGGACGAATCACCGAAACAAGACGGGT1732940.5636128751590684No Hit
TCGATCGTTACCATCTAGTGGAAAGGACGAATCACCGTACCCCTACCAAC1515820.4929978351377538No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGATTCACCGAACCCCTAGCAAC1458710.4744236598631717No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAATCACCGTACCCCTACCAACT1417600.4610532458281853No Hit
CGATCATGATCGTCTTCTGGAAAGGACGAATCACCGTACCCCTACCAACT1413550.45973604376441257No Hit
ATCGATTCCTTGGTTCTTGTGGAAAGGACGATACACCGAACCCCTTCCAA1406820.45754721169300766No Hit
CGATCAAGATCGTCTTCTGGAAAGGACGAAACACCGAACCCCTACCAACT1393120.4530914911316037No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACACCGTACCCCTACCAACT1370600.4457671971868727No Hit
CGATCAAGATCGTCTTCTGGAAAGGACGAATGACCGAACCCCTACCAACT1331930.4331903567409247No Hit
TCGATCCTTACCATCTAGTGGAAAGGACGATTCACCGAAACAAGACGGGT1313870.4273166112417309No Hit
TCGATCCTTACCATCTAGTGGAAAGGACGATTCACCGAACCCCTAGCAAC1293000.4205289551748332No Hit
CGATCAAGATCGTCTTCTGGAAAGGACGAATCACCGAACCCCTACCAACT1272340.4138095984742051No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGATACACCGAACCCCTACCAAC1260730.4100336192247235No Hit
CGATCATGATCGTCTTCTGGAAAGGACGAATGACCGAACCCCTACGAACT1198430.38977147389804745No Hit
TCGATCCTTACCATCTAGTGGAAAGGACGAATCACCGAACCCCTACCAAC1109520.36085482315976875No Hit
CGATCAAGATCGTCTTGTGGAAAGGACGAATCACCGAACCCCTACCAACT1090950.35481520777106285No Hit
CGATCATGATCGTCTTCTGGAAAGGACGAAAGACCGAACCCCTACCAACT1046440.3403389944726624No Hit
CGATCAAGATCGTCTTGTGGAAAGGACGAATGACCGAACCCCTACCAACT1038320.3376980856435675No Hit
TCGATCGTTACCATCTAGTGGAAAGGACGAAACACCGAAACAAGACGGGT1034180.3363516124228221No Hit
TCGATCGTTACCATCTAGTGGAAAGGACGAAACACCGTACCCCTACCAAC992510.3227990667444499No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAAGACCGAACCCCTACCAACT973840.31672692784799655No Hit
TCGATCGTTACCATCTAGTGGAAAGGACGATTCACCGAAACAAGAGGGGT962140.3129216774415422No Hit
CGATCATGATCGTCTTCTGGAAAGGACGAATGACCGTACCCCTACCAACT951190.30936035334319384No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAATGACCGTACCCCTACCAACT947470.3081504788549878No Hit
CGATCAAGATCGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACT923650.3004033793095396No Hit
TCGATCCTTACCATCTAGTGGAAAGGACGATTCACCGTACCCCTACCAAC921980.2998602367301568No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAATGACCGAACCCCTACGAACT855140.27812152415174546No Hit
ATCGATACCTTGGTTCTTGTGGAAAGGACGTTACACCGAACCCCTTCCAA846170.27520416550679705No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAATCACCGAAACAAGACGGGT840440.2733405685128668No Hit
CGATCATGATCGTCTTCTGGAAAGGACGAATCACCGAACCCCTACGAACT813860.26469582015358833No Hit
ATCGATTCCTTGGTTCATGTGGAAAGGACGATACACCGAACCCCTACCAA802140.2608840650455844No Hit
CGATCAAGATCGTCTTCTGGAAAGGACGAATGACCGAACCCCTACGAACT791350.25737477855963203No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAATCACCGTACCCCTACCAAC764790.24873653490190306No Hit
ATCGATACCTTGGTTCTTGTGGAAAGGACGAAACACCGTACCCCTACCAA731860.23802654380066005No Hit
ATCGATTCCTTGGTTCATGTGGAAAGGACGATACACCGAACCCCTTCCAA687790.2236934339363484No Hit
TCGATCCTTACCATCTTGTGGAAAGGACGATTCACCGAAACAAGACGGGT679750.22107854391345155No Hit
TCGATCGTTACCATCTAGTGGAAAGGACGATTCACCGTACCCCTAGCAAC613690.19959351469547051No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAATCACCGAACCCCTACGAACT607080.19744371083336254No Hit
TCGATCCTTACCATCTAGTGGAAAGGACGAAACACCGAACCCCTACCAAC603670.19633465921917365No Hit
TCGATCGTTACCATCTAGTGGAAAGGACGATACACCGAAACAAGACGGGT561750.18270080477143275No Hit
ATCGATACCTTGGTTCATGTGGAAAGGACGTTACACCGAACCCCTTCCAA534840.17394872883658763No Hit
ATCGATACCTTGGTTCTTGTGGAAAGGACGATACACCGAAACAAGACGGG501460.16309238195048092No Hit
TCGATCCTTACCATCTTGTGGAAAGGACGATTCACCGAACCCCTAGCAAC481520.15660719450563473No Hit
TCGATCCTTACCATCTTGTGGAAAGGACGATTCACCGTACCCCTACCAAC479680.15600876196308122No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGATTCACCGAAACAAGAGGGGT472290.1536052747405429No Hit
TCGATCCTTACCATCTTGTGGAAAGGACGAATCACCGAACCCCTACCAAC440180.14316197640282916No Hit
CGATCAAGATCGTCTTGTGGAAAGGACGAATGACCGAACCCCTACGAACT439910.14307416293191094No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACACCGAAACAAGACGGGT432570.1406869374632464No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACACCGTACCCCTACCAAC422340.13735978262067985No Hit
TCGATCGTTACCATCTAGTGGAAAGGACGATACACCGTACCCCTACCAAC418300.13604583290768194No Hit
TCGATCCTTACCATCTAGTGGAAAGGACGATTCACCGAAACAAGAGGGGT409050.13303740844104062No Hit
TCGATCGTTACCATCTAGTGGAAAGGACGAATCACCGAACCCCTAGCAAC395990.12878983832922056No Hit
ATCGATTCCTTGGTTCTTGTGGAAAGGACGATACACCGTACCCCTACCAA357190.11617071732320083No Hit
ATCGATACCTTGGTTCATGTGGAAAGGACGAAACACCGTACCCCTACCAA343990.11187761430053432No Hit
ATCGATACCTTGGTTCTTGTGGAAAGGACGAAACACCGAACCCCTTCCAA321750.10464438617749619No Hit
ATCGATACCTTGGTTCTTGTGGAAAGGACGATACACCGAAACAAGTCGGG316260.1028588456021599No Hit
CGATCAAGATCGTCTTCTGGAAAGGACGAAAGACCGAACCCCTACCAACT309600.10069277998617815No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)