Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content H5GM2BGYW_n01_SRS_129_4N_Rep1_unox_16 H5GM2BGYW_n01_SRS_129_4N_Rep1_unox_16.fastq.gz Conventional base calls Sanger / Illumina 1.9 14421473.0 0.0 76.0 49.0 66.75723179055089 76.0 pass pass pass pass fail pass pass pass warn warn fail H5GM2BGYW_n01_SRS_129_4N_Rep2_unox_17 H5GM2BGYW_n01_SRS_129_4N_Rep2_unox_17.fastq.gz Conventional base calls Sanger / Illumina 1.9 11307540.0 0.0 76.0 48.0 74.75177804130821 76.0 pass pass pass pass fail pass pass pass pass warn fail H5GM2BGYW_n01_SRS_129_4N_Rep3_unox_18 H5GM2BGYW_n01_SRS_129_4N_Rep3_unox_18.fastq.gz Conventional base calls Sanger / Illumina 1.9 12230249.0 0.0 76.0 49.0 53.736511070065085 76.0 pass pass pass pass fail pass pass pass warn warn fail H5GM2BGYW_n01_SRS_35oligos_rep2_19 H5GM2BGYW_n01_SRS_35oligos_rep2_19.fastq.gz Conventional base calls Sanger / Illumina 1.9 5488914.0 0.0 76.0 49.0 65.00207021264664 76.0 pass pass pass pass fail pass pass pass warn warn fail H5GM2BGYW_n01_SRS_35oligos_rep3_20 H5GM2BGYW_n01_SRS_35oligos_rep3_20.fastq.gz Conventional base calls Sanger / Illumina 1.9 7120845.0 0.0 76.0 50.0 65.64126780161523 76.0 pass pass pass pass fail pass pass pass warn warn fail H5GM2BGYW_n01_SRS_35oligos_rep4_21 H5GM2BGYW_n01_SRS_35oligos_rep4_21.fastq.gz Conventional base calls Sanger / Illumina 1.9 12208193.0 0.0 76.0 49.0 49.35322936269551 76.0 pass pass pass pass fail pass pass pass fail warn fail H5GM2BGYW_n01_SRS_B6_4N_Rep1_unox_13 H5GM2BGYW_n01_SRS_B6_4N_Rep1_unox_13.fastq.gz Conventional base calls Sanger / Illumina 1.9 15225253.0 0.0 76.0 47.0 73.6656480346416 76.0 pass pass pass pass fail pass pass pass pass warn fail H5GM2BGYW_n01_SRS_B6_4N_Rep2_unox_14 H5GM2BGYW_n01_SRS_B6_4N_Rep2_unox_14.fastq.gz Conventional base calls Sanger / Illumina 1.9 13720555.0 0.0 76.0 47.0 73.1907085382402 76.0 pass pass pass pass fail pass pass pass pass warn fail H5GM2BGYW_n01_SRS_B6_4N_Rep3_unox_15 H5GM2BGYW_n01_SRS_B6_4N_Rep3_unox_15.fastq.gz Conventional base calls Sanger / Illumina 1.9 13269145.0 0.0 76.0 47.0 64.27295217016913 76.0 pass pass pass pass fail pass pass pass warn warn fail H5GM2BGYW_n01_SRS_FVB_4N_Rep1_unox_22 H5GM2BGYW_n01_SRS_FVB_4N_Rep1_unox_22.fastq.gz Conventional base calls Sanger / Illumina 1.9 11043103.0 0.0 76.0 48.0 70.40927807334765 76.0 pass pass pass pass fail pass pass pass pass warn fail H5GM2BGYW_n01_SRS_FVB_4N_Rep2_unox_23 H5GM2BGYW_n01_SRS_FVB_4N_Rep2_unox_23.fastq.gz Conventional base calls Sanger / Illumina 1.9 8300526.0 0.0 76.0 48.0 68.59176127799452 76.0 pass pass pass pass fail pass pass pass warn warn fail H5GM2BGYW_n01_SRS_FVB_4N_Rep3_unox_24 H5GM2BGYW_n01_SRS_FVB_4N_Rep3_unox_24.fastq.gz Conventional base calls Sanger / Illumina 1.9 27417697.0 0.0 76.0 49.0 36.2470235186312 76.0 pass pass pass pass fail pass pass pass fail warn fail H5GM2BGYW_n01_SRS_S2_Hen1_clone1_Rep2_ox_1 H5GM2BGYW_n01_SRS_S2_Hen1_clone1_Rep2_ox_1.fastq.gz Conventional base calls Sanger / Illumina 1.9 12063724.0 0.0 76.0 50.0 37.8475310436516 76.0 pass pass pass pass fail pass pass pass fail fail fail H5GM2BGYW_n01_SRS_S2_Hen1_clone1_Rep2_unox_7 H5GM2BGYW_n01_SRS_S2_Hen1_clone1_Rep2_unox_7.fastq.gz Conventional base calls Sanger / Illumina 1.9 15627649.0 0.0 76.0 48.0 76.20551432241065 76.0 pass pass pass pass fail pass pass pass pass warn fail H5GM2BGYW_n01_SRS_S2_Hen1_clone2_Rep2_ox_2 H5GM2BGYW_n01_SRS_S2_Hen1_clone2_Rep2_ox_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 10232298.0 0.0 76.0 50.0 33.35945475737171 76.0 pass pass pass pass fail pass pass pass fail fail fail H5GM2BGYW_n01_SRS_S2_Hen1_clone2_Rep2_unox_8 H5GM2BGYW_n01_SRS_S2_Hen1_clone2_Rep2_unox_8.fastq.gz Conventional base calls Sanger / Illumina 1.9 13341845.0 0.0 76.0 48.0 78.68266976778288 76.0 pass pass pass pass fail pass pass pass pass pass fail H5GM2BGYW_n01_SRS_S2_Hen1_clone3_Rep2_ox_3 H5GM2BGYW_n01_SRS_S2_Hen1_clone3_Rep2_ox_3.fastq.gz Conventional base calls Sanger / Illumina 1.9 11456818.0 0.0 76.0 50.0 37.38211063141825 76.0 pass pass pass pass fail pass pass pass fail fail fail H5GM2BGYW_n01_SRS_S2_Hen1_clone3_Rep2_unox_9 H5GM2BGYW_n01_SRS_S2_Hen1_clone3_Rep2_unox_9.fastq.gz Conventional base calls Sanger / Illumina 1.9 7102164.0 0.0 76.0 48.0 80.44649426302645 76.0 pass pass pass pass fail pass pass pass pass warn fail H5GM2BGYW_n01_SRS_S2_WT_clone1_Rep2_ox_4 H5GM2BGYW_n01_SRS_S2_WT_clone1_Rep2_ox_4.fastq.gz Conventional base calls Sanger / Illumina 1.9 11997780.0 0.0 76.0 50.0 44.454127988117854 76.0 pass pass pass pass fail pass pass pass fail fail fail H5GM2BGYW_n01_SRS_S2_WT_clone1_Rep2_unox_10 H5GM2BGYW_n01_SRS_S2_WT_clone1_Rep2_unox_10.fastq.gz Conventional base calls Sanger / Illumina 1.9 11553276.0 0.0 76.0 47.0 59.51672576401189 76.0 pass pass pass pass fail pass pass pass warn warn fail H5GM2BGYW_n01_SRS_S2_WT_clone2_Rep2_ox_5 H5GM2BGYW_n01_SRS_S2_WT_clone2_Rep2_ox_5.fastq.gz Conventional base calls Sanger / Illumina 1.9 11514727.0 0.0 76.0 51.0 71.97589584251088 76.0 pass pass pass pass fail warn pass pass pass warn fail H5GM2BGYW_n01_SRS_S2_WT_clone2_Rep2_unox_11 H5GM2BGYW_n01_SRS_S2_WT_clone2_Rep2_unox_11.fastq.gz Conventional base calls Sanger / Illumina 1.9 11955464.0 0.0 76.0 48.0 69.08342670613776 76.0 pass pass pass pass fail pass pass pass warn warn fail H5GM2BGYW_n01_SRS_S2_WT_clone3_Rep2_ox_6 H5GM2BGYW_n01_SRS_S2_WT_clone3_Rep2_ox_6.fastq.gz Conventional base calls Sanger / Illumina 1.9 10874363.0 0.0 76.0 50.0 64.39578061952594 76.0 pass pass pass pass fail pass pass pass warn warn fail H5GM2BGYW_n01_SRS_S2_WT_clone3_Rep2_unox_12 H5GM2BGYW_n01_SRS_S2_WT_clone3_Rep2_unox_12.fastq.gz Conventional base calls Sanger / Illumina 1.9 15286313.0 0.0 76.0 48.0 63.52666668092499 76.0 pass pass pass pass fail pass pass pass warn warn fail H5GM2BGYW_n01_undetermined H5GM2BGYW_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 94497184.0 0.0 76.0 45.0 13.125648207179605 76.0 pass pass pass pass pass warn pass pass fail pass fail