[2024-10-24 02:26:19,708] multiqc [DEBUG ] No MultiQC config found: /share/apps/multiqc/1.9/lib/python3.8/site-packages/multiqc_config.yaml [2024-10-24 02:26:19,708] multiqc [DEBUG ] No MultiQC config found: /home/gencore/.multiqc_config.yaml [2024-10-24 02:26:19,708] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml [2024-10-24 02:26:19,710] multiqc [DEBUG ] Loading config settings from: /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml [2024-10-24 02:26:19,710] multiqc [DEBUG ] New config 'report_section_order': {'general_stats': {'order': 1000}, 'demux_report': {'order': 900}, 'demux_report-1': {'order': 900}, 'demux_report-2': {'order': 900}, 'undetermined_barcodes': {'order': 800}, 'run_stats': {'order': 700}, 'fastqc': {'order': 500}} [2024-10-24 02:26:19,711] multiqc [DEBUG ] Command used: /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml . [2024-10-24 02:26:19,747] multiqc [DEBUG ] Could not connect to multiqc.info for version check: [2024-10-24 02:26:19,747] multiqc [INFO ] This is MultiQC v1.9 [2024-10-24 02:26:19,747] multiqc [DEBUG ] Command : /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml . [2024-10-24 02:26:19,747] multiqc [DEBUG ] Working dir : /scratch/gencore/GENEFLOW/work/nf/fc/30dadf5a277552678a12e2f70676f4/merged [2024-10-24 02:26:19,747] multiqc [INFO ] Template : default [2024-10-24 02:26:19,747] multiqc [DEBUG ] Running Python 3.8.6 (default, Oct 11 2020, 20:34:31) [GCC Intel(R) C++ gcc 8.3.1 mode] [2024-10-24 02:26:19,747] multiqc [INFO ] Searching : /scratch/gencore/GENEFLOW/work/nf/fc/30dadf5a277552678a12e2f70676f4/merged [2024-10-24 02:26:19,747] multiqc [DEBUG ] Analysing modules: custom_content, conpair, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, goleft_indexcov, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, homer, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, mtnucratio, picard, prokka, samblaster, samtools, sexdeterrmine, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, interop, ivar, flash, seqyclean [2024-10-24 02:26:19,748] multiqc [DEBUG ] Using temporary directory for creating report: /state/partition1/job-52607734/tmpc9l4i0fb [2024-10-24 02:26:19,863] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5GM2BGYW_n01_undetermined_fastqc.html [2024-10-24 02:26:19,866] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5GM2BGYW_n01_undetermined_fastqc.html [2024-10-24 02:26:19,918] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_S2_WT_clone3_Rep2_ox_6_fastqc.html [2024-10-24 02:26:19,920] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_S2_WT_clone3_Rep2_ox_6_fastqc.html [2024-10-24 02:26:19,982] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: undetermined_barcodes.txt [2024-10-24 02:26:19,984] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: undetermined_barcodes.txt [2024-10-24 02:26:20,134] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_129_4N_Rep2_unox_17_fastqc.html [2024-10-24 02:26:20,136] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_129_4N_Rep2_unox_17_fastqc.html [2024-10-24 02:26:20,191] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_S2_Hen1_clone3_Rep2_unox_9_fastqc.html [2024-10-24 02:26:20,192] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_S2_Hen1_clone3_Rep2_unox_9_fastqc.html [2024-10-24 02:26:20,249] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_S2_WT_clone3_Rep2_unox_12_fastqc.html [2024-10-24 02:26:20,251] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_S2_WT_clone3_Rep2_unox_12_fastqc.html [2024-10-24 02:26:20,310] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_S2_Hen1_clone1_Rep2_ox_1_fastqc.html [2024-10-24 02:26:20,313] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_S2_Hen1_clone1_Rep2_ox_1_fastqc.html [2024-10-24 02:26:20,383] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_S2_WT_clone2_Rep2_unox_11_fastqc.html [2024-10-24 02:26:20,385] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_S2_WT_clone2_Rep2_unox_11_fastqc.html [2024-10-24 02:26:20,443] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_B6_4N_Rep2_unox_14_fastqc.html [2024-10-24 02:26:20,444] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_B6_4N_Rep2_unox_14_fastqc.html [2024-10-24 02:26:20,500] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_FVB_4N_Rep3_unox_24_fastqc.html [2024-10-24 02:26:20,502] multiqc [DEBUG ] File ignored 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H5GM2BGYW_n01_SRS_S2_WT_clone1_Rep2_unox_10_fastqc.html [2024-10-24 02:26:20,689] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_S2_WT_clone1_Rep2_unox_10_fastqc.html [2024-10-24 02:26:20,747] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_FVB_4N_Rep2_unox_23_fastqc.html [2024-10-24 02:26:20,749] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_FVB_4N_Rep2_unox_23_fastqc.html [2024-10-24 02:26:20,819] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_35oligos_rep3_20_fastqc.html [2024-10-24 02:26:20,821] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_35oligos_rep3_20_fastqc.html [2024-10-24 02:26:20,882] multiqc [DEBUG ] File 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H5GM2BGYW_n01_SRS_B6_4N_Rep3_unox_15_fastqc.html [2024-10-24 02:26:21,072] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_S2_WT_clone1_Rep2_ox_4_fastqc.html [2024-10-24 02:26:21,074] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_S2_WT_clone1_Rep2_ox_4_fastqc.html [2024-10-24 02:26:21,137] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_S2_Hen1_clone2_Rep2_unox_8_fastqc.html [2024-10-24 02:26:21,139] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_S2_Hen1_clone2_Rep2_unox_8_fastqc.html [2024-10-24 02:26:21,196] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_FVB_4N_Rep1_unox_22_fastqc.html [2024-10-24 02:26:21,198] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_FVB_4N_Rep1_unox_22_fastqc.html [2024-10-24 02:26:21,254] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_129_4N_Rep3_unox_18_fastqc.html [2024-10-24 02:26:21,256] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_129_4N_Rep3_unox_18_fastqc.html [2024-10-24 02:26:21,312] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_129_4N_Rep1_unox_16_fastqc.html [2024-10-24 02:26:21,314] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_129_4N_Rep1_unox_16_fastqc.html [2024-10-24 02:26:21,371] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_35oligos_rep4_21_fastqc.html [2024-10-24 02:26:21,373] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_35oligos_rep4_21_fastqc.html [2024-10-24 02:26:21,433] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_S2_Hen1_clone3_Rep2_ox_3_fastqc.html [2024-10-24 02:26:21,435] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_S2_Hen1_clone3_Rep2_ox_3_fastqc.html [2024-10-24 02:26:21,502] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_B6_4N_Rep1_unox_13_fastqc.html [2024-10-24 02:26:21,504] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5GM2BGYW_n01_SRS_B6_4N_Rep1_unox_13_fastqc.html [2024-10-24 02:26:21,890] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.3.2 [2024-10-24 02:26:21,892] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.3.2 [2024-10-24 02:26:21,912] multiqc.modules.custom_content.custom_content [INFO ] demux_report: Found 25 samples (table) [2024-10-24 02:26:21,922] multiqc.modules.custom_content.custom_content [INFO ] undetermined_barcodes: Found 20 samples (table) [2024-10-24 02:26:21,924] multiqc.modules.custom_content.custom_content [INFO ] run_stats: Found 1 samples (table) [2024-10-24 02:26:21,930] multiqc [DEBUG ] No samples found: conpair [2024-10-24 02:26:21,936] multiqc [DEBUG ] No samples found: peddy [2024-10-24 02:26:21,945] multiqc [DEBUG ] No samples found: somalier [2024-10-24 02:26:21,950] multiqc [DEBUG ] No samples found: methylQA [2024-10-24 02:26:21,959] multiqc [DEBUG ] No samples found: mosdepth [2024-10-24 02:26:21,964] multiqc [DEBUG ] No samples found: phantompeakqualtools [2024-10-24 02:26:21,968] multiqc [DEBUG ] No samples found: qualimap [2024-10-24 02:26:21,973] multiqc [DEBUG ] No samples found: preseq [2024-10-24 02:26:21,979] multiqc [DEBUG ] No samples found: quast [2024-10-24 02:26:21,984] multiqc [DEBUG ] No samples found: qorts [2024-10-24 02:26:21,989] multiqc [DEBUG ] No samples found: rna_seqc [2024-10-24 02:26:21,994] multiqc [DEBUG ] No samples found: rockhopper [2024-10-24 02:26:21,999] multiqc [DEBUG ] No samples found: rsem [2024-10-24 02:26:22,011] multiqc [DEBUG ] No samples found: rseqc [2024-10-24 02:26:22,016] multiqc [DEBUG ] No samples found: busco [2024-10-24 02:26:22,021] multiqc [DEBUG ] No samples found: goleft_indexcov [2024-10-24 02:26:22,026] multiqc [DEBUG ] No samples found: disambiguate [2024-10-24 02:26:22,031] multiqc [DEBUG ] No samples found: supernova [2024-10-24 02:26:22,046] multiqc [DEBUG ] No samples found: deeptools [2024-10-24 02:26:22,050] multiqc [DEBUG ] No samples found: sargasso [2024-10-24 02:26:22,055] multiqc [DEBUG ] No samples found: verifybamid [2024-10-24 02:26:22,060] multiqc [DEBUG ] No samples found: mirtrace [2024-10-24 02:26:22,065] multiqc [DEBUG ] No samples found: happy [2024-10-24 02:26:22,070] multiqc [DEBUG ] No samples found: mirtop [2024-10-24 02:26:22,077] multiqc [DEBUG ] No samples found: homer [2024-10-24 02:26:22,082] multiqc [DEBUG ] No samples found: macs2 [2024-10-24 02:26:22,087] multiqc [DEBUG ] No samples found: theta2 [2024-10-24 02:26:22,092] multiqc [DEBUG ] No samples found: snpeff [2024-10-24 02:26:22,100] multiqc [DEBUG ] No samples found: gatk [2024-10-24 02:26:22,106] multiqc [DEBUG ] No samples found: htseq [2024-10-24 02:26:22,113] multiqc [DEBUG ] No samples found: bcftools [2024-10-24 02:26:22,119] multiqc [DEBUG ] No samples found: featureCounts [2024-10-24 02:26:22,126] multiqc [DEBUG ] No samples found: fgbio [2024-10-24 02:26:22,142] multiqc [DEBUG ] No samples found: dragen [2024-10-24 02:26:22,147] multiqc [DEBUG ] No samples found: dedup [2024-10-24 02:26:22,153] multiqc [DEBUG ] No samples found: damageprofiler [2024-10-24 02:26:22,178] multiqc [DEBUG ] No samples found: biobambam2 [2024-10-24 02:26:22,182] multiqc [DEBUG ] No samples found: mtnucratio [2024-10-24 02:26:22,184] multiqc [DEBUG ] No samples found: picard [2024-10-24 02:26:22,189] multiqc [DEBUG ] No samples found: prokka [2024-10-24 02:26:22,194] multiqc [DEBUG ] No samples found: samblaster [2024-10-24 02:26:22,205] multiqc [DEBUG ] No samples found: samtools [2024-10-24 02:26:22,210] multiqc [DEBUG ] No samples found: sexdeterrmine [2024-10-24 02:26:22,216] multiqc [DEBUG ] No samples found: bamtools [2024-10-24 02:26:22,220] multiqc [DEBUG ] No samples found: jellyfish [2024-10-24 02:26:22,230] multiqc [DEBUG ] No samples found: vcftools [2024-10-24 02:26:22,235] multiqc [DEBUG ] No samples found: longranger [2024-10-24 02:26:22,240] multiqc [DEBUG ] No samples found: stacks [2024-10-24 02:26:22,245] multiqc [DEBUG ] No samples found: varscan2 [2024-10-24 02:26:22,260] multiqc [DEBUG ] No samples found: bbmap [2024-10-24 02:26:22,265] multiqc [DEBUG ] No samples found: bismark [2024-10-24 02:26:22,270] multiqc [DEBUG ] No samples found: biscuit [2024-10-24 02:26:22,276] multiqc [DEBUG ] No samples found: hicexplorer [2024-10-24 02:26:22,281] multiqc [DEBUG ] No samples found: hicup [2024-10-24 02:26:22,286] multiqc [DEBUG ] No samples found: hicpro [2024-10-24 02:26:22,290] multiqc [DEBUG ] No samples found: salmon [2024-10-24 02:26:22,296] multiqc [DEBUG ] No samples found: kallisto [2024-10-24 02:26:22,302] multiqc [DEBUG ] No samples found: slamdunk [2024-10-24 02:26:22,307] multiqc [DEBUG ] No samples found: star [2024-10-24 02:26:22,313] multiqc [DEBUG ] No samples found: hisat2 [2024-10-24 02:26:22,318] multiqc [DEBUG ] No samples found: tophat [2024-10-24 02:26:22,324] multiqc [DEBUG ] No samples found: bowtie2 [2024-10-24 02:26:22,329] multiqc [DEBUG ] No samples found: bowtie1 [2024-10-24 02:26:22,334] multiqc [DEBUG ] No samples found: snpsplit [2024-10-24 02:26:22,339] multiqc [DEBUG ] No samples found: kat [2024-10-24 02:26:22,344] multiqc [DEBUG ] No samples found: leehom [2024-10-24 02:26:22,349] multiqc [DEBUG ] No samples found: adapterRemoval [2024-10-24 02:26:22,354] multiqc [DEBUG ] No samples found: clipandmerge [2024-10-24 02:26:22,359] multiqc [DEBUG ] No samples found: cutadapt [2024-10-24 02:26:22,363] multiqc [DEBUG ] No samples found: flexbar [2024-10-24 02:26:22,368] multiqc [DEBUG ] No samples found: kaiju [2024-10-24 02:26:22,373] multiqc [DEBUG ] No samples found: kraken [2024-10-24 02:26:22,378] multiqc [DEBUG ] No samples found: malt [2024-10-24 02:26:22,383] multiqc [DEBUG ] No samples found: trimmomatic [2024-10-24 02:26:22,388] multiqc [DEBUG ] No samples found: sickle [2024-10-24 02:26:22,393] multiqc [DEBUG ] No samples found: skewer [2024-10-24 02:26:22,398] multiqc [DEBUG ] No samples found: sortmerna [2024-10-24 02:26:22,403] multiqc [DEBUG ] No samples found: biobloomtools [2024-10-24 02:26:22,408] multiqc [DEBUG ] No samples found: fastq_screen [2024-10-24 02:26:22,412] multiqc [DEBUG ] No samples found: afterqc [2024-10-24 02:26:22,418] multiqc [DEBUG ] No samples found: fastp [2024-10-24 02:26:24,264] multiqc.modules.fastqc.fastqc [INFO ] Found 25 reports [2024-10-24 02:26:24,842] multiqc [DEBUG ] No samples found: pycoqc [2024-10-24 02:26:24,847] multiqc [DEBUG ] No samples found: minionqc [2024-10-24 02:26:24,853] multiqc [DEBUG ] No samples found: multivcfanalyzer [2024-10-24 02:26:24,858] multiqc [DEBUG ] No samples found: clusterflow [2024-10-24 02:26:24,865] multiqc [DEBUG ] No samples found: bcl2fastq [2024-10-24 02:26:24,872] multiqc [DEBUG ] No samples found: interop [2024-10-24 02:26:24,877] multiqc [DEBUG ] No samples found: ivar [2024-10-24 02:26:24,883] multiqc [DEBUG ] No samples found: flash [2024-10-24 02:26:24,888] multiqc [DEBUG ] No samples found: seqyclean [2024-10-24 02:26:24,888] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found. [2024-10-24 02:26:24,888] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found. [2024-10-24 02:26:24,888] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found. [2024-10-24 02:26:24,888] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Demultiplexing Report'. [2024-10-24 02:26:24,888] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Demultiplexing Report'. [2024-10-24 02:26:24,888] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Demultiplexing Report'. [2024-10-24 02:26:24,888] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Demultiplexing Report'. [2024-10-24 02:26:24,888] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Demultiplexing Report'. [2024-10-24 02:26:24,888] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Demultiplexing Report'. [2024-10-24 02:26:24,888] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module ' Barcodes of Undetermined Reads'. [2024-10-24 02:26:24,888] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module ' Barcodes of Undetermined Reads'. [2024-10-24 02:26:24,888] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module ' Barcodes of Undetermined Reads'. [2024-10-24 02:26:24,888] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module ' Barcodes of Undetermined Reads'. [2024-10-24 02:26:24,888] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module ' Barcodes of Undetermined Reads'. [2024-10-24 02:26:24,888] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module ' Barcodes of Undetermined Reads'. [2024-10-24 02:26:24,888] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module ' Barcodes of Undetermined Reads'. [2024-10-24 02:26:24,888] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Run Statistics'. [2024-10-24 02:26:24,889] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Run Statistics'. [2024-10-24 02:26:24,889] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'Run Statistics'. [2024-10-24 02:26:24,889] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Run Statistics'. [2024-10-24 02:26:24,889] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Run Statistics'. [2024-10-24 02:26:24,889] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Run Statistics'. [2024-10-24 02:26:24,889] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Run Statistics'. [2024-10-24 02:26:24,889] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'FastQC'. [2024-10-24 02:26:24,889] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'FastQC'. [2024-10-24 02:26:24,889] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'FastQC'. [2024-10-24 02:26:24,889] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'FastQC'. [2024-10-24 02:26:24,889] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'FastQC'. [2024-10-24 02:26:24,889] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'FastQC'. [2024-10-24 02:26:24,889] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'FastQC'. [2024-10-24 02:26:24,920] multiqc [INFO ] Compressing plot data [2024-10-24 02:26:25,419] multiqc [INFO ] Report : multiqc_report.html [2024-10-24 02:26:25,419] multiqc [INFO ] Data : multiqc_data [2024-10-24 02:26:25,419] multiqc [DEBUG ] Moving data file from '/state/partition1/job-52607734/tmpc9l4i0fb/multiqc_data' to '/scratch/gencore/GENEFLOW/work/nf/fc/30dadf5a277552678a12e2f70676f4/merged/multiqc_data' [2024-10-24 02:26:25,570] multiqc [INFO ] MultiQC complete