FastQCFastQC Report
Sat 19 Oct 2024
H5GFVBGYW_n01_DO141.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH5GFVBGYW_n01_DO141.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21458065
Sequences flagged as poor quality0
Sequence length76
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACTTGAATCGGGGGTGG228530.10650074925208773TruSeq Adapter, Index 8 (97% over 42bp)

[OK]Adapter Content

Adapter graph