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        If you use plots from MultiQC in a publication or presentation, please cite:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

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        About MultiQC

        This report was generated using MultiQC, version 1.0.dev0

        You can see a YouTube video describing how to use MultiQC reports here: https://youtu.be/qPbIlO_KWN0

        For more information about MultiQC, including other videos and extensive documentation, please visit http://multiqc.info

        You can report bugs, suggest improvements and find the source code for MultiQC on GitHub: https://github.com/ewels/MultiQC

        MultiQC is published in Bioinformatics:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

        A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.

        Report generated on 2020-03-13, 12:03 based on data in: /beegfs/mk5636/logs/html/H5GFMAFX2/merged

        Demultiplexing Report

        Demultiplexing Report
        Total Read Count: Total number of PF (Passing Filter) reads in this library.
        Portion: The proportion of reads that represent the individual library in the entire Library Pool.

        Showing 97/97 rows and 2/2 columns.
        Sample NameTotal Read CountPortion (%)
        undetermined_library
        0.0
        0.0
        B1S5_rep1
        0.0
        0.0
        B1S6_rep1
        0.0
        0.0
        B1S7_rep1
        0.0
        0.0
        B1S8_rep1
        0.0
        0.0
        B1S9_rep1
        0.0
        0.0
        B1S10_rep1
        0.0
        0.0
        B1S11_rep1
        0.0
        0.0
        B1S12_rep1
        0.0
        0.0
        B1S13_rep1
        0.0
        0.0
        B1S14_rep1
        0.0
        0.0
        B2S4_rep1
        0.0
        0.0
        B2S5_rep1
        0.0
        0.0
        B2S6_rep1
        0.0
        0.0
        B2S7_rep1
        0.0
        0.0
        B2S8_rep1
        0.0
        0.0
        B2S9_rep1
        0.0
        0.0
        B2S10_rep1
        0.0
        0.0
        B2S11_rep1
        0.0
        0.0
        B2S12_rep1
        0.0
        0.0
        B2S13_rep1
        0.0
        0.0
        B2S17_rep1
        0.0
        0.0
        B2S18_rep1
        0.0
        0.0
        B2S19_rep1
        0.0
        0.0
        B2S20_rep1
        0.0
        0.0
        B2S21_rep1
        0.0
        0.0
        B2S22_rep1
        0.0
        0.0
        B1S4_rep1
        0.0
        0.0
        B2S3_rep1
        0.0
        0.0
        B2S14_rep2
        0.0
        0.0
        Plasmid_control_PR8PB2
        0.0
        0.0
        Lib_prep_NC_water
        0.0
        0.0
        No_index_control_water
        0.0
        0.0
        B1S5_rep2
        0.0
        0.0
        B1S6_rep2
        0.0
        0.0
        B1S7_rep2
        0.0
        0.0
        B1S8_rep2
        0.0
        0.0
        B1S9_rep2
        0.0
        0.0
        B1S10_rep2
        0.0
        0.0
        B1S11_rep2
        0.0
        0.0
        B1S12_rep2
        0.0
        0.0
        B1S13_rep2
        0.0
        0.0
        B1S14_rep2
        0.0
        0.0
        B2S4_rep2
        0.0
        0.0
        B2S5_rep2
        0.0
        0.0
        B2S6_rep2
        0.0
        0.0
        B2S7_rep2
        0.0
        0.0
        B2S8_rep2
        0.0
        0.0
        B2S9_rep2
        0.0
        0.0
        B2S10_rep2
        0.0
        0.0
        B2S11_rep2
        0.0
        0.0
        B2S12_rep2
        0.0
        0.0
        B2S13_rep2
        0.0
        0.0
        B2S17_rep2
        0.0
        0.0
        B2S18_rep2
        0.0
        0.0
        B2S19_rep2
        0.0
        0.0
        B2S20_rep2
        0.0
        0.0
        B2S21_rep2
        0.0
        0.0
        B2S22_rep2
        0.0
        0.0
        Mirella1
        0.0
        0.0
        Mirella2
        0.0
        0.0
        Mirella3
        0.0
        0.0
        Mirella4
        0.0
        0.0
        Mirella5
        0.0
        0.0
        Mirella6
        0.0
        0.0
        DARPA_FLUB1
        0.0
        0.0
        DARPA_FLUB2
        0.0
        0.0
        DARPA_FLUB3
        0.0
        0.0
        DARPA_FLUB4
        0.0
        0.0
        DARPA_FLUB5
        0.0
        0.0
        DARPA_FLUB6
        0.0
        0.0
        DARPA_FLUB7
        0.0
        0.0
        DARPA_FLUB8
        0.0
        0.0
        DARPA_FLUB9
        0.0
        0.0
        DARPA_FLUB10
        0.0
        0.0
        DARPA_FLUB11
        0.0
        0.0
        DARPA_FLUB12
        0.0
        0.0
        DARPA_FLUB13
        0.0
        0.0
        DARPA_FLUB14
        0.0
        0.0
        DARPA_FLUB15
        0.0
        0.0
        DARPA_FLUB16
        0.0
        0.0
        DARPA_FLUB17
        0.0
        0.0
        DARPA_FLUB18
        0.0
        0.0
        DARPA_FLUB19
        0.0
        0.0
        DARPA_FLUB20
        0.0
        0.0
        DARPA_FLUB21
        0.0
        0.0
        DARPA_FLUB22
        0.0
        0.0
        DARPA_FLUB23
        0.0
        0.0
        DARPA_FLUB24
        0.0
        0.0
        DARPA_FLUB25
        0.0
        0.0
        DARPA_FLUB26
        0.0
        0.0
        DARPA_FLUB27
        0.0
        0.0
        DARPA_FLUB28
        0.0
        0.0
        DARPA_FLUB29
        0.0
        0.0
        DARPA_FLUB30
        0.0
        0.0
        DARPA_FLUB31
        0.0
        0.0
        DARPA_AHA5
        0.0
        0.0

        Run Statistics

        Run Statistics

        Showing 1/1 rows and 4/4 columns.
        Sample NameTotal # of Single-End ReadsTotal # PF Reads% Undetermined% PhiX Aligned
        4.0
        177,421,504
        0.0
        100.0
        3.6

        MultiQC v1.0.dev0 - Written by Phil Ewels, available on GitHub.

        This report uses HighCharts, jQuery, jQuery UI, Bootstrap, FileSaver.js and clipboard.js.