H5C72BCXX l02n01 mk275.3410000000f342.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H5C72BCXX l02n01 mk275.3410000000f342.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5525676
Sequences flagged as poor quality	0
Sequence length	51
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGTACGATCTCGTATGCC	227070	4.109361460932562	TruSeq Adapter, Index 22 (98% over 51bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGTACGATATCGTATGCC	6955	0.12586695274931067	TruSeq Adapter, Index 22 (97% over 41bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CACACGT	27185	43.47581	12
GCACACG	27565	42.92544	11
AGCACAC	27630	42.897747	10
CCGTACG	26435	42.887886	33
CACGTCT	27485	42.878475	14
CGTACGA	26425	42.844517	34
GATCGGA	27945	42.81391	1
ACCGTAC	26635	42.785477	32
AGTCACC	26965	42.770836	28
GTATGCC	26680	42.747044	45
CACCGTA	26740	42.693195	31
ACGTCTG	27665	42.575092	15
GTCTGAA	27720	42.547436	17
GTACGAT	25285	42.542732	35
CGTCTGA	27670	42.51048	16
ACACGTC	27775	42.455082	13
CGTATGC	26950	42.335472	44
TCGGAAG	28360	42.131702	3
ATCGGAA	28430	42.102715	2
TCTGAAC	28005	41.961792	18