[2024-05-25 23:59:54,526] multiqc [DEBUG ] No MultiQC config found: /share/apps/multiqc/1.9/lib/python3.8/site-packages/multiqc_config.yaml [2024-05-25 23:59:54,526] multiqc [DEBUG ] No MultiQC config found: /home/gencore/.multiqc_config.yaml [2024-05-25 23:59:54,526] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml [2024-05-25 23:59:54,529] multiqc [DEBUG ] Loading config settings from: /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml [2024-05-25 23:59:54,529] multiqc [DEBUG ] New config 'report_section_order': {'general_stats': {'order': 1000}, 'demux_report': {'order': 900}, 'demux_report-1': {'order': 900}, 'demux_report-2': {'order': 900}, 'undetermined_barcodes': {'order': 800}, 'run_stats': {'order': 700}, 'fastqc': {'order': 500}} [2024-05-25 23:59:54,529] multiqc [DEBUG ] Command used: /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml . [2024-05-25 23:59:54,565] multiqc [DEBUG ] Could not connect to multiqc.info for version check: [2024-05-25 23:59:54,565] multiqc [INFO ] This is MultiQC v1.9 [2024-05-25 23:59:54,565] multiqc [DEBUG ] Command : /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml . [2024-05-25 23:59:54,565] multiqc [DEBUG ] Working dir : /vast/gencore/GENEFLOW/work/d7/628d67f9968dd20c68faf2234b0afd/merged [2024-05-25 23:59:54,565] multiqc [INFO ] Template : default [2024-05-25 23:59:54,565] multiqc [DEBUG ] Running Python 3.8.6 (default, Oct 11 2020, 20:34:31) [GCC Intel(R) C++ gcc 8.3.1 mode] [2024-05-25 23:59:54,565] multiqc [INFO ] Searching : /vast/gencore/GENEFLOW/work/d7/628d67f9968dd20c68faf2234b0afd/merged [2024-05-25 23:59:54,565] multiqc [DEBUG ] Analysing modules: custom_content, conpair, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, goleft_indexcov, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, homer, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, mtnucratio, picard, prokka, samblaster, samtools, sexdeterrmine, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, interop, ivar, flash, seqyclean [2024-05-25 23:59:54,565] multiqc [DEBUG ] Using temporary directory for creating report: /state/partition1/job-46995203/tmpxyljzjl7 [2024-05-25 23:59:54,698] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5C3VDRX5_n01_WGS_A_thaliana_001_fastqc.html [2024-05-25 23:59:54,705] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5C3VDRX5_n01_WGS_A_thaliana_001_fastqc.html [2024-05-25 23:59:54,786] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize 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H5C3VDRX5_n02_WGS_A_thaliana_080_fastqc.html [2024-05-26 00:00:06,678] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5C3VDRX5_n02_WGS_A_thaliana_080_fastqc.html [2024-05-26 00:00:06,749] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5C3VDRX5_n02_WGS_A_thaliana_081_fastqc.html [2024-05-26 00:00:06,757] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5C3VDRX5_n02_WGS_A_thaliana_081_fastqc.html [2024-05-26 00:00:06,827] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5C3VDRX5_n02_WGS_A_thaliana_082_fastqc.html [2024-05-26 00:00:06,833] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5C3VDRX5_n02_WGS_A_thaliana_082_fastqc.html [2024-05-26 00:00:06,902] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5C3VDRX5_n02_WGS_A_thaliana_083_fastqc.html [2024-05-26 00:00:06,910] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5C3VDRX5_n02_WGS_A_thaliana_083_fastqc.html [2024-05-26 00:00:06,981] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5C3VDRX5_n02_WGS_A_thaliana_084_fastqc.html [2024-05-26 00:00:06,992] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5C3VDRX5_n02_WGS_A_thaliana_084_fastqc.html [2024-05-26 00:00:07,061] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5C3VDRX5_n02_WGS_A_thaliana_085_fastqc.html [2024-05-26 00:00:07,069] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5C3VDRX5_n02_WGS_A_thaliana_085_fastqc.html [2024-05-26 00:00:07,140] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H5C3VDRX5_n02_undetermined_fastqc.html [2024-05-26 00:00:07,147] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H5C3VDRX5_n02_undetermined_fastqc.html [2024-05-26 00:00:07,755] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.3.2 [2024-05-26 00:00:07,757] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.3.2 [2024-05-26 00:00:07,807] multiqc.modules.custom_content.custom_content [INFO ] demux_report: Found 86 samples (table) [2024-05-26 00:00:07,809] multiqc.modules.custom_content.custom_content [INFO ] run_stats: Found 1 samples (table) [2024-05-26 00:00:07,819] multiqc.modules.custom_content.custom_content [INFO ] undetermined_barcodes: Found 20 samples (table) [2024-05-26 00:00:07,824] multiqc [DEBUG ] No samples found: conpair [2024-05-26 00:00:07,829] multiqc [DEBUG ] No samples found: peddy [2024-05-26 00:00:07,835] multiqc [DEBUG ] No samples found: somalier [2024-05-26 00:00:07,840] multiqc [DEBUG ] No samples found: methylQA [2024-05-26 00:00:07,849] multiqc [DEBUG ] No samples found: mosdepth [2024-05-26 00:00:07,854] multiqc [DEBUG ] No samples found: phantompeakqualtools [2024-05-26 00:00:07,857] multiqc [DEBUG ] No samples found: qualimap [2024-05-26 00:00:07,862] multiqc [DEBUG ] No samples found: preseq [2024-05-26 00:00:07,867] multiqc [DEBUG ] No samples found: quast [2024-05-26 00:00:07,872] multiqc [DEBUG ] No samples found: qorts [2024-05-26 00:00:07,878] multiqc [DEBUG ] No samples found: rna_seqc [2024-05-26 00:00:07,883] multiqc [DEBUG ] No samples found: rockhopper [2024-05-26 00:00:07,888] multiqc [DEBUG ] No samples found: rsem [2024-05-26 00:00:07,901] multiqc [DEBUG ] No samples found: rseqc [2024-05-26 00:00:07,906] multiqc [DEBUG ] No samples found: busco [2024-05-26 00:00:07,911] multiqc [DEBUG ] No samples found: goleft_indexcov [2024-05-26 00:00:07,915] multiqc [DEBUG ] No samples found: disambiguate [2024-05-26 00:00:07,920] multiqc [DEBUG ] No samples found: supernova [2024-05-26 00:00:07,934] multiqc [DEBUG ] No samples found: deeptools [2024-05-26 00:00:07,939] multiqc [DEBUG ] No samples found: sargasso [2024-05-26 00:00:07,944] multiqc [DEBUG ] No samples found: verifybamid [2024-05-26 00:00:07,949] multiqc [DEBUG ] No samples found: mirtrace [2024-05-26 00:00:07,954] multiqc [DEBUG ] No samples found: happy [2024-05-26 00:00:07,959] multiqc [DEBUG ] No samples found: mirtop [2024-05-26 00:00:07,966] multiqc [DEBUG ] No samples found: homer [2024-05-26 00:00:07,971] multiqc [DEBUG ] No samples found: macs2 [2024-05-26 00:00:07,976] multiqc [DEBUG ] No samples found: theta2 [2024-05-26 00:00:07,981] multiqc [DEBUG ] No samples found: snpeff [2024-05-26 00:00:07,988] multiqc [DEBUG ] No samples found: gatk [2024-05-26 00:00:07,993] multiqc [DEBUG ] No samples found: htseq [2024-05-26 00:00:07,999] multiqc [DEBUG ] No samples found: bcftools [2024-05-26 00:00:08,004] multiqc [DEBUG ] No samples found: featureCounts [2024-05-26 00:00:08,011] multiqc [DEBUG ] No samples found: fgbio [2024-05-26 00:00:08,024] multiqc [DEBUG ] No samples found: dragen [2024-05-26 00:00:08,029] multiqc [DEBUG ] No samples found: dedup [2024-05-26 00:00:08,034] multiqc [DEBUG ] No samples found: damageprofiler [2024-05-26 00:00:08,058] multiqc [DEBUG ] No samples found: biobambam2 [2024-05-26 00:00:08,063] multiqc [DEBUG ] No samples found: mtnucratio [2024-05-26 00:00:08,065] multiqc [DEBUG ] No samples found: picard [2024-05-26 00:00:08,070] multiqc [DEBUG ] No samples found: prokka [2024-05-26 00:00:08,075] multiqc [DEBUG ] No samples found: samblaster [2024-05-26 00:00:08,084] multiqc [DEBUG ] No samples found: samtools [2024-05-26 00:00:08,089] multiqc [DEBUG ] No samples found: sexdeterrmine [2024-05-26 00:00:08,095] multiqc [DEBUG ] No samples found: bamtools [2024-05-26 00:00:08,099] multiqc [DEBUG ] No samples found: jellyfish [2024-05-26 00:00:08,108] multiqc [DEBUG ] No samples found: vcftools [2024-05-26 00:00:08,113] multiqc [DEBUG ] No samples found: longranger [2024-05-26 00:00:08,118] multiqc [DEBUG ] No samples found: stacks [2024-05-26 00:00:08,123] multiqc [DEBUG ] No samples found: varscan2 [2024-05-26 00:00:08,138] multiqc [DEBUG ] No samples found: bbmap [2024-05-26 00:00:08,143] multiqc [DEBUG ] No samples found: bismark [2024-05-26 00:00:08,148] multiqc [DEBUG ] No samples found: biscuit [2024-05-26 00:00:08,153] multiqc [DEBUG ] No samples found: hicexplorer [2024-05-26 00:00:08,158] multiqc [DEBUG ] No samples found: hicup [2024-05-26 00:00:08,163] multiqc [DEBUG ] No samples found: hicpro [2024-05-26 00:00:08,168] multiqc [DEBUG ] No samples found: salmon [2024-05-26 00:00:08,173] multiqc [DEBUG ] No samples found: kallisto [2024-05-26 00:00:08,178] multiqc [DEBUG ] No samples found: slamdunk [2024-05-26 00:00:08,183] multiqc [DEBUG ] No samples found: star [2024-05-26 00:00:08,188] multiqc [DEBUG ] No samples found: hisat2 [2024-05-26 00:00:08,192] multiqc [DEBUG ] No samples found: tophat [2024-05-26 00:00:08,197] multiqc [DEBUG ] No samples found: bowtie2 [2024-05-26 00:00:08,202] multiqc [DEBUG ] No samples found: bowtie1 [2024-05-26 00:00:08,207] multiqc [DEBUG ] No samples found: snpsplit [2024-05-26 00:00:08,212] multiqc [DEBUG ] No samples found: kat [2024-05-26 00:00:08,217] multiqc [DEBUG ] No samples found: leehom [2024-05-26 00:00:08,222] multiqc [DEBUG ] No samples found: adapterRemoval [2024-05-26 00:00:08,227] multiqc [DEBUG ] No samples found: clipandmerge [2024-05-26 00:00:08,232] multiqc [DEBUG ] No samples found: cutadapt [2024-05-26 00:00:08,237] multiqc [DEBUG ] No samples found: flexbar [2024-05-26 00:00:08,241] multiqc [DEBUG ] No samples found: kaiju [2024-05-26 00:00:08,246] multiqc [DEBUG ] No samples found: kraken [2024-05-26 00:00:08,251] multiqc [DEBUG ] No samples found: malt [2024-05-26 00:00:08,256] multiqc [DEBUG ] No samples found: trimmomatic [2024-05-26 00:00:08,261] multiqc [DEBUG ] No samples found: sickle [2024-05-26 00:00:08,267] multiqc [DEBUG ] No samples found: skewer [2024-05-26 00:00:08,271] multiqc [DEBUG ] No samples found: sortmerna [2024-05-26 00:00:08,277] multiqc [DEBUG ] No samples found: biobloomtools [2024-05-26 00:00:08,282] multiqc [DEBUG ] No samples found: fastq_screen [2024-05-26 00:00:08,286] multiqc [DEBUG ] No samples found: afterqc [2024-05-26 00:00:08,292] multiqc [DEBUG ] No samples found: fastp [2024-05-26 00:00:12,215] multiqc.modules.fastqc.fastqc [INFO ] Found 172 reports [2024-05-26 00:00:12,220] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n01_WGS_A_thaliana_025' [2024-05-26 00:00:12,220] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n01_WGS_A_thaliana_026' [2024-05-26 00:00:12,220] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n01_WGS_A_thaliana_027' [2024-05-26 00:00:12,220] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n01_WGS_A_thaliana_028' [2024-05-26 00:00:12,220] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n01_WGS_A_thaliana_029' [2024-05-26 00:00:12,220] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n01_WGS_A_thaliana_030' [2024-05-26 00:00:12,220] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n01_WGS_A_thaliana_031' [2024-05-26 00:00:12,220] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n01_WGS_A_thaliana_064' [2024-05-26 00:00:12,220] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n01_WGS_A_thaliana_065' [2024-05-26 00:00:12,220] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n01_WGS_A_thaliana_066' [2024-05-26 00:00:12,220] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n01_WGS_A_thaliana_067' [2024-05-26 00:00:12,220] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n01_WGS_A_thaliana_068' [2024-05-26 00:00:12,220] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n01_WGS_A_thaliana_069' [2024-05-26 00:00:12,220] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n01_WGS_A_thaliana_070' [2024-05-26 00:00:12,220] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n01_WGS_A_thaliana_071' [2024-05-26 00:00:12,221] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n02_WGS_A_thaliana_025' [2024-05-26 00:00:12,221] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n02_WGS_A_thaliana_026' [2024-05-26 00:00:12,221] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n02_WGS_A_thaliana_027' [2024-05-26 00:00:12,221] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n02_WGS_A_thaliana_028' [2024-05-26 00:00:12,221] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n02_WGS_A_thaliana_029' [2024-05-26 00:00:12,221] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n02_WGS_A_thaliana_030' [2024-05-26 00:00:12,221] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n02_WGS_A_thaliana_031' [2024-05-26 00:00:12,221] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n02_WGS_A_thaliana_064' [2024-05-26 00:00:12,221] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n02_WGS_A_thaliana_065' [2024-05-26 00:00:12,221] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n02_WGS_A_thaliana_066' [2024-05-26 00:00:12,221] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n02_WGS_A_thaliana_067' [2024-05-26 00:00:12,221] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n02_WGS_A_thaliana_068' [2024-05-26 00:00:12,221] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n02_WGS_A_thaliana_069' [2024-05-26 00:00:12,221] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n02_WGS_A_thaliana_070' [2024-05-26 00:00:12,221] multiqc.modules.fastqc.fastqc [WARNING] Sample had zero reads: 'H5C3VDRX5_n02_WGS_A_thaliana_071' [2024-05-26 00:00:27,662] multiqc [DEBUG ] No samples found: pycoqc [2024-05-26 00:00:27,678] multiqc [DEBUG ] No samples found: minionqc [2024-05-26 00:00:27,685] multiqc [DEBUG ] No samples found: multivcfanalyzer [2024-05-26 00:00:27,697] multiqc [DEBUG ] No samples found: clusterflow [2024-05-26 00:00:27,718] multiqc [DEBUG ] No samples found: bcl2fastq [2024-05-26 00:00:27,725] multiqc [DEBUG ] No samples found: interop [2024-05-26 00:00:27,732] multiqc [DEBUG ] No samples found: ivar [2024-05-26 00:00:27,743] multiqc [DEBUG ] No samples found: flash [2024-05-26 00:00:27,750] multiqc [DEBUG ] No samples found: seqyclean [2024-05-26 00:00:27,750] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found. [2024-05-26 00:00:27,750] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found. [2024-05-26 00:00:27,750] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found. [2024-05-26 00:00:27,750] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Demultiplexing Report'. [2024-05-26 00:00:27,750] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Demultiplexing Report'. [2024-05-26 00:00:27,750] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Demultiplexing Report'. [2024-05-26 00:00:27,750] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Demultiplexing Report'. [2024-05-26 00:00:27,750] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Demultiplexing Report'. [2024-05-26 00:00:27,750] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Demultiplexing Report'. [2024-05-26 00:00:27,750] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module ' Barcodes of Undetermined Reads'. [2024-05-26 00:00:27,750] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module ' Barcodes of Undetermined Reads'. [2024-05-26 00:00:27,750] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module ' Barcodes of Undetermined Reads'. [2024-05-26 00:00:27,750] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module ' Barcodes of Undetermined Reads'. [2024-05-26 00:00:27,750] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module ' Barcodes of Undetermined Reads'. [2024-05-26 00:00:27,750] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module ' Barcodes of Undetermined Reads'. [2024-05-26 00:00:27,750] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module ' Barcodes of Undetermined Reads'. [2024-05-26 00:00:27,750] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Run Statistics'. [2024-05-26 00:00:27,750] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Run Statistics'. [2024-05-26 00:00:27,750] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'Run Statistics'. [2024-05-26 00:00:27,750] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Run Statistics'. [2024-05-26 00:00:27,750] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Run Statistics'. [2024-05-26 00:00:27,750] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Run Statistics'. [2024-05-26 00:00:27,751] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Run Statistics'. [2024-05-26 00:00:27,751] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'FastQC'. [2024-05-26 00:00:27,751] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'FastQC'. [2024-05-26 00:00:27,751] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'FastQC'. [2024-05-26 00:00:27,751] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'FastQC'. [2024-05-26 00:00:27,751] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'FastQC'. [2024-05-26 00:00:27,751] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'FastQC'. [2024-05-26 00:00:27,751] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'FastQC'. [2024-05-26 00:00:27,951] multiqc [INFO ] Compressing plot data [2024-05-26 00:00:28,025] multiqc [INFO ] Report : multiqc_report.html [2024-05-26 00:00:28,025] multiqc [INFO ] Data : multiqc_data [2024-05-26 00:00:28,025] multiqc [DEBUG ] Moving data file from '/state/partition1/job-46995203/tmpxyljzjl7/multiqc_data' to '/vast/gencore/GENEFLOW/work/d7/628d67f9968dd20c68faf2234b0afd/merged/multiqc_data' [2024-05-26 00:00:28,310] multiqc [INFO ] MultiQC complete