FastQCFastQC Report
Mon 29 May 2023
H55TVDSX7_n02_A48.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55TVDSX7_n02_A48.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22722
Sequences flagged as poor quality0
Sequence length100
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCCAGGTAGGTGATTTTCCTGCCCCAGCCTCCCAAGTAGCTGGGATTA9784.304198574069184No Hit
CTGCAGCAGATCATTTCATATTGCTTCCGTGGAGTGTGGCGAGTCAGCTA7913.48120764017252No Hit
CCCTTCCCCTACTCATCGCACTGATTTACACTCACAACACCCTAGGCTCA6732.9618871578206143No Hit
GTACTGTTAAGGGTGGGTAGGTTTGTTGGTATCCTAGTGGGTGAGGGGTG6432.8298565267141975No Hit
AGACAGACCGGTGTGTGGGGTCCAGGGCAGGCTGACCACGTCCATATCAG6182.7198310007921838No Hit
GGGTCACGGAGGTCGCCCGGGGATGTCACTCAGACCGTGGCCCCTCCACA6172.7154299797553034No Hit
CAGCTGCAGTGGCAGGTACATGAAACTCTACCGCCACCTAGTGGTCACAC5212.29293196021477No Hit
TCCCCATACTAGTTATTATCGAAACCATCAGCCTACTCATTCAACCAATA4942.174104392218995No Hit
GGCCAGAAGGTTCCGTTCCCTGTGGGGCAGGGCCTGTCCGTTGGCGCGCT4902.1565003080714726No Hit
GCGTTGGCCCAGCACTTCCACTTCTAGGGATCTGTCTCTTATACACATCT4712.0728809083707422No Hit
ACCTTCTAGAGGCTGCTCTCATTCTTTGGCTCAGGGGAGTATATCCTTCT4632.0376727400756978No Hit
GGTCAATGTTCTCAACTCTTCCCGCCCACCAGCGCCCTGTGTCTGTCTCT4612.0288706980019366No Hit
ACAGAGGACAGTGGGCTCAAGCAAGCAGCTCCAAAGCCTGTTACTGAATT4401.9364492562274447No Hit
GGGTGGGGCGGGGCCCGATGGCGCGCAGCCAATGGTAGGCCGCGCCTGGC3871.703195141272775No Hit
GATTAGGATAGTTGCACTGAGGTGGAGAGATCCTCGGGCAGAATGAAAGG3551.5623624680925974No Hit
GCTGTGCTCGAGGGTGCGGAAACAGCAGGGTGGGGGGAGTTGGGAATAAT3541.557961447055717No Hit
TGGCTAAGCATAGTGGGGTATCTAATCCCAGTTTGGGTCTTAGCTGTCGT3111.368717542469853No Hit
GGGGTAGGCAGCTGGGAAGATGACGTAATGTGCTCCCAGCCAGGCCTGGA2991.3159052900272865No Hit
CCCTGGGGGTGTGGGCGCTGCTCCAGACTCTCCGATGCTCACTTGTGGTT2911.2806971217322418No Hit
CCACTACAATCTTCCTAGGAACAACATATGACGCACTCTCCCCTGAACTC2821.241087932400317No Hit
TCCATGGCCACCGTCCTGCTGTCTATATCAACCAACACCTTTTCTGGGGT2761.2146818061790334No Hit
GGTTAGTTGTGGCAATAAAAATGATTAAGGATACTAGTATAAGAGATCAG2761.2146818061790334No Hit
GTCTTGAACTCACAGAGATGCACAAAGCCTCTGGTCTCTAGTGCTGGAAT2761.2146818061790334No Hit
GGCTCGGGCTCCGGCAACCGGGCTCAGCCAATCACCATCCGCCCCCCACT2731.2014787430683918No Hit
GGCTCTGAGGGAAGATCCTCGCTGCCTCTCCAGCTCTCCTGGCTGGGCCG2691.1838746589208697No Hit
CCCCTACGCCCAGGCCCAGGCCCAGTGCTGGATCCTGCACTTTCCCAACC2621.1530675116627058No Hit
CCACCAAAATGGTGGCATATGAGCTGCATGATAGGAACGAGAATGATATT2571.131062406478303No Hit
GGTCTAGGGTGTAGCCTGAGAATAGGGGAAATCAGTGAATGAAGCCTCCT2511.1046562802570195No Hit
CTGATGTCGGTGACGTCTAATACTAGGCTAGGCGAAGTTACCTAGTTCCT2421.0650470909250946No Hit
ACCTCCCTGCTACCTCATGGAAAAAAAAATGGAAGGAACTCTACTCAGAA2381.0474430067775724No Hit
CGCTGATTGGGCGGCCGGCAGGGCCGGAGGCCGGCAGCGCAGGCTCGGCC2381.0474430067775724No Hit
CTGATGATTAGCAATGTTGAGCAACTTTTCCCCTGAATTTTTGGCCACGG2361.0386409647038113No Hit
CCTTCGGGTAGAGGAACTGCGTACTGGTCGGGGTAGTGGTCACCAGCCCG2020.8890062494498724No Hit
CCTCTCTACCTTCTCAGCTAACAGCTCAGTGACAGCAGGGTTCTTTGTAC1960.8626001232285889No Hit
GACACGAGGTGAGGTTTGGGGGATGGGGCAGCACAGATCCAAAGTTCATG1930.8493970601179475No Hit
ATGGTGGTGTGGGGCGTAGTTCCCATTGGGGTTCGTGGCATTTGCCTTGC1760.7745797024909779No Hit
GATCTGTCCCGGGGCAGCCTGGGAAATGGAGTCAGACCTCGCTCTTACAC1690.7437725552328139No Hit
GCGGGAGAGACCATCAGCAGCATTATTTTGGCTCAAAGTAAAAGTCTATA1690.7437725552328139No Hit
CACCATGTTGGCCCACTTTGACTCTTGAGCAGCCTGGCCAGCCCGACCGC1640.7217674500484111No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1610.7085643869377696No Hit
CCTTTTACCTCATCCTATTTTCCCTTGCTGCTTCATTTACTTGATTACTT1450.6381480503476806No Hit
CTGAGAGCCCTCGCGTCCCAGGCCCCAGCCAGGGGGCCGGCCTTGTCCCG1350.5941378399788751No Hit
TCATGGGGCAGCAATGTGGGTACCCTACCTTCAGCAGATATGGTAGCTGT1290.5677317137575918No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGG1240.545726608573189No Hit
ACCGCATTGGCTCATACCGGCCTCGGCTTCACGTCTATTGGAAGGAACCG1230.5413255875363084No Hit
GTCATGAGGTAGCAACAAAAACCATTTTATGTTCGGGGTCACCACAGTCT1200.5281225244256668No Hit
AACTTAGCATTAACCTTTTAAGTTAAAGATTAAGAGAACCAACACCTCTT1200.5281225244256668No Hit
GGGAAGAGGGAAGGCAGGGCTAGGGGCAAGGCACGAAGAGGAGGGGGCGG1180.5193204823519056No Hit
CCTCTGGGCAGTGTGCCTGCCTGACTTTACAGGCCTTTCCCTGTCTCTTA1070.47090925094621955No Hit
GTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACA920.40489393539301116No Hit
CGTAAAATGTAACTAAACTCACCCCTACCACATCCCTCTGTGTAAAAATG900.39609189331925004No Hit
CATTTAGGGGCAAGTAAGAGATTATCAGTTTGTTCCTACATGATTTTTTT830.3652847460610862No Hit
TAGCAGAACCGGCCAGCGCCTTGAAACCAAGAAGGTGCAGGAAGCTGCAG670.29486840947099724No Hit
CCTCAGGTCCAGTCTCAGGTTCGGGCTCCGCGGCTTCCCGCGACCGTTAA480.2112490097702667No Hit
GGCCTGGGTACGGCAGCATGGAGCCCTCGGACCACGCCCTGTCTCTTATA460.20244696769650558No Hit
GGCTCTGAGGGAAGATCCTCGCTGCCTCTCCAGCTCTCCTGGCTGGGCCA330.14523369421705837No Hit
GAGCAGGGGGCGGACTCCTACAGTACCTGGCCTGAGAGACGCCTCTTTTT320.14083267318017778No Hit
GACGCACACAGTGGAGGTGAATGCCTGTCTTCTACTTTGGGTGAAGGAGG280.12322858903265559No Hit
AGCCCGCCCTGTCCTCCGCGCCGCGCGCCGGGCCCGCTGTTTTCCCCACC250.11002552592201391No Hit
ACCCTATAGGTGGAACAACATTATGAACTAACCAGTACCCCTGAGCTCTT240.10562450488513335No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)