FastQCFastQC Report
Mon 29 May 2023
H55TVDSX7_n02_A33.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55TVDSX7_n02_A33.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences881475
Sequences flagged as poor quality0
Sequence length100
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG13190.1496355540429394No Hit
CCCATGTTCCCTCCCGTCCAGACAGAGGCCACAACACTCAGCAGGGGTCA12310.1396522873592558No Hit
CATCTCTGGCCGCCCAGGGCAGCTCGGCTCGGTCTCGCAACCCCAGCCCA11620.13182449870954932No Hit
GTGCTGCCACCTGCTGGCCAGATGCAGCCCTGCAGCTGACTGAGGCTCTC10330.1171899373209677No Hit
GGCCCGGGCCTCACGAAGCCCCTGTAGAGGGGGACCTTTGAGAGACACCG9630.10924870245894666No Hit
GACGCAGGGACACCTGGGGTGAGTAGTTTTTTTCGTCGCCTAACAATTCC9610.10902181003431748No Hit
TCCATACCCATTACAATCTCCAGCATTCCCCCTCAAACCTAAGAAATATG9090.10312260699395898No Hit
GACCTGGAGCTGTGGGGAGAAGGCAGCCTTTTAGTGAGGAGCCGCCGCGT8940.10142091380924019No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)