FastQCFastQC Report
Mon 29 May 2023
H55TVDSX7_n02_A22.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55TVDSX7_n02_A22.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6538394
Sequences flagged as poor quality0
Sequence length100
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG84740.12960369167107397No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACC70230.10741169773494837No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)