FastQCFastQC Report
Tue 22 Jun 2021
H55KCBGXJ_n01_AKM252.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55KCBGXJ_n01_AKM252.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12742419
Sequences flagged as poor quality0
Sequence length76
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTAGCTTATCTCGTATGC1633981.28231539082179TruSeq Adapter, Index 10 (100% over 50bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTAGCTTATCGCGTATGC174340.13681860563524084TruSeq Adapter, Index 10 (98% over 50bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)