H55FTAFXY_n01_p7h7.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H55FTAFXY_n01_p7h7.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	216989
Sequences flagged as poor quality	0
Sequence length	151
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3419	1.5756559088248714	No Hit
GTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	894	0.41200245173718486	No Hit
CTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	759	0.3497873164077442	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	701	0.3230578508587993	No Hit
CGTCTAGATCGGAAGAGCACACGTCTAGATCGGAAGAGCACACGTCTAGA	286	0.13180391632755578	Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)
GACGTGTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	235	0.10830042075865598	No Hit
CCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCCGGAATTTTAACCGG	220	0.10138762794427367	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTAGAGT	50	2.0067216E-4	58.0	4
CTTATGG	40	0.0060445257	54.375	1
GATAGTT	40	0.0060445257	54.375	7
TCATAGA	55	3.2133772E-4	52.727276	2
TAGAGTG	105	6.8728696E-8	48.333332	5
TTATGGG	45	0.009629044	48.333332	2
GTACAGG	170	3.8198777E-11	42.647057	1
ATGTTGC	90	7.463054E-5	40.27778	1
TCTAGCC	110	5.245247E-6	39.545456	8
GTAGGGA	130	3.6805432E-7	39.03846	3
ACACATA	75	0.0014808243	38.666668	145
GTACTTG	115	7.1169034E-6	37.826088	1
TGTTAAG	440	0.0	36.250004	8
CTGGTGT	180	3.1759555E-9	36.25	4
GTCCTGG	205	2.8921932E-10	35.365852	1
ATGGTGT	165	5.979746E-8	35.151516	4
GTTAAGA	460	0.0	34.673916	9
CATGGTG	210	3.7471182E-10	34.523808	3
ATCTAGC	150	1.1284665E-6	33.833336	7
CCATGGT	195	6.9394446E-9	33.46154	2