H55FTAFXY_n01_p7h6.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H55FTAFXY_n01_p7h6.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	205054
Sequences flagged as poor quality	0
Sequence length	151
%GC	55

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2373	1.1572561374077073	No Hit
GTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	646	0.3150389653457138	No Hit
CGTCTAGATCGGAAGAGCACACGTCTAGATCGGAAGAGCACACGTCTAGA	463	0.22579418104499302	Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	429	0.2092131828689028	No Hit
CTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	427	0.20823783003501517	No Hit
GGATAACATCATAGGATTTCGATCCTATTGTGTTGGCCTTCGGGATCGGA	369	0.17995259785227308	No Hit
GTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAAC	347	0.1692237166795088	No Hit
ATCTAGACGTGTGCTCTTCCGATCTAGACGTGTGCTCTTCCGATCTAGAC	286	0.13947545524593521	Illumina Multiplexing PCR Primer 2.01 (95% over 22bp)
CCTATAAGCAACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGA	252	0.12289445706984502	No Hit
GTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACT	243	0.11850536931735055	No Hit
ACCTATACCCGGCCGTCGGGGCAAGAGCCAGGCCTCGATGAGTAGGAGGG	236	0.11509163439874373	No Hit
GAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGA	225	0.10972719381236162	No Hit
AAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCATGGGA	224	0.1092395173954178	No Hit
GACGTGTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	216	0.10533810605986717	No Hit
GGATACATTAGCATGGGATAACATCATAGGATTTCGATCCTATTGTGTTG	213	0.10387507680903567	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCCTTT	35	0.0035624863	62.142754	7
GAGCCTT	40	0.0060440954	54.37491	6
ATAACGC	55	3.212988E-4	52.72718	9
TCTTGCT	60	4.935869E-4	48.333252	8
CTTCCAA	85	5.3189833E-5	42.657387	1
GATAACG	70	0.001054684	41.4285	8
CCGGACT	70	0.001054684	41.4285	4
CTGCACT	115	7.115079E-6	37.826023	9
TTCTAGA	80	0.002030432	36.258778	1
TCCGGAC	100	1.3876092E-4	36.24994	3
ATCTTGT	80	0.002032865	36.24994	7
ATCTTGC	165	5.977199E-8	35.15146	7
GATGGCA	105	1.8486124E-4	34.52375	8
CTTCAGG	85	0.0027336797	34.12591	1
TCTGTGC	175	1.0025542E-7	33.1428	8
GGTGGCA	110	2.4294594E-4	32.95449	7
TCTGTAC	110	2.4294594E-4	32.95449	8
CTGTCCA	155	1.4575144E-6	32.74188	9
CCTCCGG	90	0.0036172653	32.230026	1
GCGACCC	90	0.0036215899	32.222168	9