H55FTAFXY_n01_p7h4.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H55FTAFXY_n01_p7h4.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	169260
Sequences flagged as poor quality	0
Sequence length	151
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2229	1.3169088975540588	No Hit
GTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	745	0.4401512466028595	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	474	0.28004253810705426	No Hit
CTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	467	0.27590688881011466	No Hit
CCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCCGGAATTTTAACCGG	269	0.1589270944109654	No Hit
GACGTGTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	208	0.1228878648233487	No Hit
ACCTATACCCGGCCGTCGGGGCAAGAGCCAGGCCTCGATGAGTAGGAGGG	187	0.11048091693252983	No Hit
GTGTTAAGAAGAGGAATTGAACCTCTGACTGTAAAGTTTTAAGTTTTATG	186	0.10989010989010989	No Hit
CGTGTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	186	0.10989010989010989	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACTGC	25	9.3731825E-4	87.0	6
ACTGTAC	25	9.3731825E-4	87.0	3
ATCCTAC	35	3.4290148E-5	82.85714	1
ACAGTGC	35	0.0035613873	62.142857	8
CGTGCTA	40	0.0060422397	54.374996	3
CTACTCT	55	3.2113545E-4	52.727272	9
CTAAGTT	55	3.2113545E-4	52.727272	4
CTACACC	55	3.2113545E-4	52.727272	4
CCTACAC	70	1.6899534E-5	51.785713	3
AGTTCCC	60	4.933368E-4	48.333332	7
GCCTAAG	60	4.933368E-4	48.333332	2
CTAGACG	195	0.0	44.615387	3
TCTACTC	85	5.3226337E-5	42.647057	8
TAAGTTC	70	0.0010541525	41.42857	5
GGCCTAA	70	0.0010541525	41.42857	1
CCTAAGT	90	7.456083E-5	40.27778	3
ACATTAG	75	0.001479903	38.666668	7
TCCTACA	75	0.001479903	38.666668	2
CCTCTCA	75	0.001479903	38.666668	9
AGACAGA	155	3.441164E-8	37.419357	6