H55FTAFXY_n01_p7h3.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H55FTAFXY_n01_p7h3.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	123160
Sequences flagged as poor quality	0
Sequence length	151
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2188	1.776550828190971	No Hit
GTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	557	0.4522572263721988	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	396	0.32153296524845726	No Hit
CTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	385	0.31260149399155573	No Hit
GACGTGTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	184	0.14939915556999026	No Hit
CGTCTAGATCGGAAGAGCACACGTCTAGATCGGAAGAGCACACGTCTAGA	155	0.12585254952906788	Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)
CGTGTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	151	0.12260474179928549	No Hit
GTGTTAAGAAGAGGAATTGAACCTCTGACTGTAAAGTTTTAAGTTTTATG	128	0.1039298473530367	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCCTAC	30	1.593869E-5	96.666664	1
TCCTACC	30	0.0019317004	72.5	2
CCTATTT	30	0.0019317004	72.5	7
CCTAGTA	40	0.006038344	54.375	2
ATCCGGA	40	0.006038344	54.375	1
CATAGGT	40	0.006038344	54.375	5
TACCTAT	40	0.006038344	54.375	5
GTATATA	40	0.006038344	54.375	1
CTACTGG	45	0.009619231	48.333332	1
TCCTGGG	120	3.5761332E-9	48.333332	2
CCTAAGG	45	0.009619231	48.333332	3
GCCTAGG	45	0.009619231	48.333332	1
ATCTTTT	530	0.0	45.141506	7
TCTTTTT	530	0.0	45.141506	8
CCTACCT	65	7.3114556E-4	44.615383	3
CTACCTA	65	7.3114556E-4	44.615383	4
GATCTTT	590	0.0	44.23729	6
GTCCTGG	120	1.9546678E-7	42.291668	1
CTTTTTT	580	0.0	41.25	9
TCTGCAA	90	7.4442294E-5	40.27778	8