H55FTAFXY_n01_p7g9.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H55FTAFXY_n01_p7g9.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	303618
Sequences flagged as poor quality	0
Sequence length	151
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2735	0.9008029826953607	No Hit
GTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1198	0.39457476170714517	No Hit
CTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	847	0.27896896758426704	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	720	0.23714009050846788	No Hit
GACGTGTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	457	0.15051808522551363	No Hit
CGTGTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	373	0.12285174133285905	No Hit
GTGTTAAGAAGAGGAATTGAACCTCTGACTGTAAAGTTTTAAGTTTTATG	338	0.11132409804425299	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTAGACT	40	0.006046844	54.375	4
TAGACTG	40	0.006046844	54.375	5
TTCTAGA	90	7.470117E-5	40.277775	1
ATAATGC	80	0.002034386	36.25	3
TGTAGAC	165	5.993206E-8	35.151516	2
GATCTGG	810	0.0	34.907406	6
TAGACGT	645	0.0	34.844963	4
CTAGACG	450	0.0	33.833336	3
ATCTGAG	260	3.6379788E-12	33.46154	7
ATCTCTG	270	5.456968E-12	32.22222	7
GTCTAGG	135	2.1373215E-5	32.22222	1
TCTATCC	180	1.2873716E-7	32.22222	8
TAAGCAT	95	0.004722167	30.526318	4
TCTCTGC	240	1.5716068E-9	30.208334	8
GTAGACG	240	1.5716068E-9	30.208334	3
TCTAGGG	170	3.0026185E-6	29.852942	2
CGATCTG	3085	0.0	29.611023	5
ATCTGGC	355	0.0	28.591549	7
TCTACAC	205	4.0235318E-7	28.292683	3
GTACAGG	180	4.6858204E-6	28.194443	1