H55FTAFXY_n01_p7g4.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H55FTAFXY_n01_p7g4.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	232400
Sequences flagged as poor quality	0
Sequence length	151
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1181	0.5081755593803787	No Hit
CCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCCGGAATTTTAACCGG	830	0.35714285714285715	No Hit
GTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	616	0.2650602409638554	No Hit
GAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTAGGGCGCGAGCCCGGGC	616	0.2650602409638554	No Hit
ACCTATACCCGGCCGTCGGGGCAAGAGCCAGGCCTCGATGAGTAGGAGGG	463	0.19922547332185883	No Hit
GTAGGAGGGCGCGGCGGTCGCTGCAAAACCTAGGGCGCGAGCCCGGGCGG	394	0.16953528399311532	No Hit
GTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAAC	390	0.16781411359724613	No Hit
TCTCCGGACTCCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCCGGAA	389	0.16738382099827884	No Hit
CTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	373	0.16049913941480207	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	325	0.13984509466437178	No Hit
TTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAACTCTTCCCGAGGC	323	0.13898450946643717	No Hit
GTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGC	321	0.13812392426850256	No Hit
GAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGA	303	0.13037865748709124	No Hit
GTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACT	275	0.11833046471600689	No Hit
GGATAACATCATAGGATTTCGATCCTATTGTGTTGGCCTTCGGGATCGGA	273	0.11746987951807229	No Hit
ACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGA	260	0.11187607573149741	No Hit
ATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTAGGGCGCGAGCCCGG	255	0.10972461273666093	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTATAGG	35	0.0035630607	62.142857	1
ATACTGC	35	0.0035630607	62.142857	6
TACTGCA	40	0.0060450668	54.375	5
CTACTGC	55	3.213854E-4	52.727276	4
TATATTG	60	4.9371965E-4	48.333332	5
GTATATG	45	0.0096299	48.333332	1
GGCTACA	45	0.0096299	48.333332	1
CTTACAC	45	0.0096299	48.333332	3
TTCTAGA	90	7.464697E-5	40.27778	1
CTGTATA	90	7.464697E-5	40.27778	4
TGTATAG	90	7.464697E-5	40.27778	5
TAACGCA	75	0.0014810419	38.666664	4
ATCTGAC	300	0.0	36.25	7
GATCTTT	825	0.0	35.151512	6
CTAGACG	270	0.0	34.90741	3
ACACATA	105	1.8493515E-4	34.52381	145
TCTTACA	85	0.0027376774	34.117645	2
CTTGCCT	85	0.0027376774	34.117645	9
TTCCTAT	85	0.0027376774	34.117645	2
TCTGTCC	150	1.1289267E-6	33.833332	8