H55FTAFXY_n01_p7d8.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H55FTAFXY_n01_p7d8.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	166325
Sequences flagged as poor quality	0
Sequence length	151
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	296	0.17796482789718926	No Hit
CCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCCGGAATTTTAACCGG	240	0.1442958064031264	No Hit
GTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAAC	223	0.13407485344957162	No Hit
ACCTATACCCGGCCGTCGGGGCAAGAGCCAGGCCTCGATGAGTAGGAGGG	208	0.1250563655493762	No Hit
GTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	189	0.11363294754246205	No Hit
GAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTAGGGCGCGAGCCCGGGC	189	0.11363294754246205	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCTGAG	90	2.035631E-8	56.38889	7
ATCTGAC	180	0.0	52.36111	7
TCTGACC	115	2.4629117E-9	50.434784	8
CTGGACT	45	0.009625119	48.333332	4
GATCTGA	340	0.0	46.911766	6
CTACCCG	80	3.7211525E-5	45.312504	9
GATCTAC	240	0.0	45.3125	6
CTCCGGC	130	7.2868716E-9	44.615383	3
CTAGGGA	165	2.7284841E-11	43.939392	3
TCCGGCT	100	2.7203478E-6	43.5	4
TTCCGAT	2900	0.0	40.5	2
CTTCCGA	2925	0.0	40.40171	1
CGATCTG	1225	0.0	40.244896	5
CCGATCT	2925	0.0	40.15385	4
TCCGATC	3020	0.0	38.890728	3
CTGAGCC	150	2.577326E-8	38.666664	9
TATATAC	75	0.0014798292	38.666664	3
TCTGTCA	80	0.0020317447	36.250004	8
ATCTACG	100	1.3864676E-4	36.25	7
GATCTTT	325	0.0	35.692307	6