H55FTAFXY_n01_p7d3.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H55FTAFXY_n01_p7d3.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	99893
Sequences flagged as poor quality	0
Sequence length	151
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	283	0.28330313435375853	No Hit
CCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCCGGAATTTTAACCGG	217	0.21723243870941908	No Hit
ACCTATACCCGGCCGTCGGGGCAAGAGCCAGGCCTCGATGAGTAGGAGGG	177	0.17718959286436486	No Hit
GTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	167	0.16717888140310133	No Hit
GAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTAGGGCGCGAGCCCGGGC	163	0.1631745968185959	No Hit
GTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAAC	155	0.15516602764958506	No Hit
GAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGA	124	0.12413282211966804	No Hit
GGATAACATCATAGGATTTCGATCCTATTGTGTTGGCCTTCGGGATCGGA	105	0.10511247034326729	No Hit
TCTCCGGACTCCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCCGGAA	104	0.10411139919714095	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTTAGA	30	0.0019306252	72.5	2
CATAGAC	40	0.006035009	54.375	2
CTCTCCA	40	0.006035009	54.375	9
CATGGTG	95	3.101195E-8	53.421055	3
CTCAACC	55	3.2049653E-4	52.727276	145
TCTCTCC	55	3.2049653E-4	52.727276	8
CTAAGGA	60	4.923581E-4	48.333332	2
GTGTGTA	90	1.3115368E-6	48.333332	9
CCTCCTA	45	0.00961394	48.333332	2
ATGGTGT	105	6.822847E-8	48.333332	4
AGTGTGT	80	3.7104015E-5	45.3125	8
ATCTTAC	65	7.304778E-4	44.615383	7
CCATGGT	100	2.7093738E-6	43.5	2
TCTAGGG	85	5.306891E-5	42.64706	2
CCTACTC	70	0.0010520739	41.42857	3
TACAGGG	90	7.434086E-5	40.27778	2
TCTAGAC	75	0.0014769934	38.666664	3
TCCTACT	75	0.0014769934	38.666664	2
GGAGTGT	95	1.02225735E-4	38.157894	6
CTAGTAG	100	1.3825003E-4	36.25	3