H55FTAFXY_n01_p7d12.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H55FTAFXY_n01_p7d12.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	71480
Sequences flagged as poor quality	0
Sequence length	151
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	883	1.2353105763850027	No Hit
GTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	303	0.42389479574706207	No Hit
CTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	172	0.24062674874090656	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	151	0.21124790151091213	No Hit
CGTGTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	77	0.10772243984331281	No Hit
GTGTTAAGAAGAGGAATTGAACCTCTGACTGTAAAGTTTTAAGTTTTATG	75	0.10492445439283715	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCTTTAA	10	0.007062584	145.10014	1
CTTATCG	10	0.007077391	144.9986	3
CTCCTTA	35	0.0035432533	62.185776	1
GATTAAG	35	0.0035432533	62.185776	1
TAGCGGA	35	0.0035531032	62.142258	6
ATCTCGC	40	0.0060115485	54.41255	1
CCATGGT	40	0.0060115485	54.41255	2
CTTTAAT	40	0.0060115485	54.41255	2
CTGTCCT	45	0.009603193	48.332863	9
TATCTCG	45	0.009603193	48.332863	145
CTTAGCG	45	0.009603193	48.332863	4
ATCTGGC	45	0.009603193	48.332863	7
TATATGT	80	3.6999416E-5	45.31206	4
TGCCAGG	65	7.26598E-4	44.646194	2
AGGTGTT	65	7.2911126E-4	44.614952	5
CGATCTG	415	0.0	40.180332	5
GATCTGG	145	1.8853825E-8	39.999615	6
CTAGGGA	95	1.01939615E-4	38.157528	4
ATATATG	80	0.0020241027	36.24965	3
GTATTTA	105	1.8291394E-4	34.547653	1