H55FTAFXY_n01_p7d10.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H55FTAFXY_n01_p7d10.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	130176
Sequences flagged as poor quality	0
Sequence length	151
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	350	0.2688667649950836	No Hit
CGTCTAGATCGGAAGAGCACACGTCTAGATCGGAAGAGCACACGTCTAGA	190	0.14595624385447392	Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)
GTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	181	0.13904252704031464	No Hit
GAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTAGGGCGCGAGCCCGGGC	174	0.13366519174041297	No Hit
CCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCCGGAATTTTAACCGG	159	0.12214233038348084	No Hit
GTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAAC	138	0.10601032448377581	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTATACT	35	3.426031E-5	82.85714	4
GTTTATA	40	0.0060391137	54.375	145
ACGACAG	40	0.0060391137	54.375	5
AACCATG	45	0.009620451	48.333332	7
GTCTATG	45	0.009620451	48.333332	2
GCCTGAA	45	0.009620451	48.333332	2
GACTGTG	45	0.009620451	48.333332	7
TATACTG	60	4.9291376E-4	48.33333	5
TATAGGT	95	1.9079453E-6	45.789474	3
CTATGAT	65	7.312994E-4	44.615387	4
GGTCTAT	65	7.312994E-4	44.615387	1
ATAGGTC	85	5.315826E-5	42.647057	4
TCCTGGG	110	5.2290598E-6	39.545456	2
GGTGGCA	160	4.537287E-8	36.25	9
TCTATAC	80	0.0020301247	36.25	3
TAGGTCG	105	1.8448936E-4	34.523808	5
CTAGGGA	190	5.349648E-9	34.342106	3
CTAGAAG	85	0.0027332727	34.117645	3
TAGAAGC	85	0.0027332727	34.117645	4
GCCTAGA	85	0.0027332727	34.117645	1