H55FTAFXY_n01_p7c10.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H55FTAFXY_n01_p7c10.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	239456
Sequences flagged as poor quality	0
Sequence length	151
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1465	0.611803421087799	No Hit
GTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	578	0.24138046238139782	No Hit
CCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCCGGAATTTTAACCGG	433	0.18082654015769076	No Hit
CTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	316	0.1319657891220099	No Hit
CGTCTAGATCGGAAGAGCACACGTCTAGATCGGAAGAGCACACGTCTAGA	294	0.12277829747427502	Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)
GAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTAGGGCGCGAGCCCGGGC	282	0.11776693839369236	No Hit
GTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAAC	276	0.11526125885340105	No Hit
ACCTATACCCGGCCGTCGGGGCAAGAGCCAGGCCTCGATGAGTAGGAGGG	271	0.11317319256982494	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGCCCTA	45	1.19202035E-4	64.44435	7
TACACCA	45	1.19202035E-4	64.44435	5
ATAGACT	35	0.0035632134	62.142765	3
ATAATTC	40	0.0060453247	54.37492	3
ACGTACA	40	0.0060453247	54.37492	2
GTCCTAA	60	4.932451E-4	48.343357	1
GCCTAGA	60	4.932451E-4	48.343357	1
GTATACG	45	0.009622366	48.343357	1
TACTACA	45	0.00963031	48.333263	2
ATACGGC	60	4.937535E-4	48.333263	3
TATACGG	60	4.937535E-4	48.333263	2
TCTAGGG	145	3.8198777E-10	44.999935	2
CGTACAC	90	7.4654425E-5	40.27772	3
GTACTGG	150	2.5806003E-8	38.674686	1
GGTGGCA	220	1.6370905E-11	36.24995	9
CTAAGAT	100	1.3883035E-4	36.249947	4
GGGCCCT	90	0.003622791	32.222176	6
TAAGCAT	90	0.003622791	32.222176	4
TCTAGAC	345	0.0	31.521692	2
CTAGACG	325	0.0	31.230726	3