H55FTAFXY_n01_p7b2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H55FTAFXY_n01_p7b2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	271096
Sequences flagged as poor quality	0
Sequence length	151
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2467	0.9100097382477057	No Hit
GTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	891	0.32866586006433146	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	632	0.23312774810399267	No Hit
CTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	606	0.22353704960604362	No Hit
GACGTGTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	330	0.12172809632012276	No Hit
GTGTTAAGAAGAGGAATTGAACCTCTGACTGTAAAGTTTTAAGTTTTATG	310	0.11435063593708503	No Hit
CGTCTAGATCGGAAGAGCACACGTCTAGATCGGAAGAGCACACGTCTAGA	301	0.11103077876471804	Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)
CGTGTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	283	0.10439106441998407	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACTAAGT	10	0.007088059	144.99982	8
GTACATA	35	0.0035611135	62.154243	1
CTTATAT	40	0.0060461783	54.37493	2
CTAACGT	80	3.7274356E-5	45.312443	3
GTTTAAT	80	0.0020321729	36.25664	1
AGGGATG	145	8.66743E-7	34.999954	5
TACGCTG	110	2.4315083E-4	32.954502	5
CTACCCT	135	2.1364993E-5	32.222183	4
CCTAACG	120	4.0503536E-4	30.208292	2
TACACTG	120	4.0503536E-4	30.208292	5
TCTAGGG	175	3.7613136E-6	28.999964	2
CTATCAC	100	0.006066792	28.999962	3
TGTAGAC	125	5.1440945E-4	28.999962	2
TTCTAGA	105	0.007691821	27.62411	1
ACTGTGT	105	0.0076987515	27.619013	8
TCTATCA	105	0.0076987515	27.619013	2
AGGTGTT	290	3.929017E-10	27.499966	6
GATGGCA	300	5.820766E-10	26.5833	8
TGTAACA	165	8.396436E-5	26.363604	2
CAGATTC	110	0.009659451	26.363602	4