H55FTAFXY_n01_p6h10.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H55FTAFXY_n01_p6h10.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2778956
Sequences flagged as poor quality	0
Sequence length	151
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTATAAGCAACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGA	4530	0.16301085731476136	No Hit
GTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAAC	4372	0.15732526891393747	No Hit
GGATAACATCATAGGATTTCGATCCTATTGTGTTGGCCTTCGGGATCGGA	4025	0.1448385652741533	No Hit
ATGTTATCCCATGCTAATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTC	4016	0.14451470264372662	No Hit
CTCGTAGACAGCGCCTCGTGGTGCGACAGGGTCCGGGCACGACGGGGCTC	3375	0.12144848641000433	No Hit
GACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGAT	3131	0.11266821065176996	No Hit
GTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACT	3093	0.11130079065663509	No Hit
GTCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATT	3076	0.1106890501324958	No Hit
TCATTACTCCGATCCCGAAGGCCAACACAATAGGATCGAAATCCTATGAT	3024	0.10881784382336387	No Hit
CTCATAAGGTGCCAGCGGAGTCCTATAAGCAACATCCGCTGATCCCTGGT	2958	0.1064428512002349	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CCGATCT	9425	40.23076	4
CTTCCGA	9530	39.712852	1
TTCCGAT	9815	38.55832	2
CGATCTG	4695	31.656008	5
TCCGATC	12920	29.79682	3
ACACATA	2045	28.36185	145
GGGCGAC	1560	28.349354	7
CGATCTA	2195	28.075165	5
TAGAGTG	1795	27.869074	5
ATAATAC	815	24.907969	3
CCTATAA	3160	24.549929	1
TCGCGCG	1655	24.531715	9
TATAGGT	1665	24.384377	3
TAAGGTG	2245	23.574604	5
TTAGAGT	2260	23.418137	4
CTATAAG	3370	22.158749	2
GTATAAG	920	22.066006	1
AGGTGCC	2375	21.67368	7
AAATTAG	2215	20.94883	1
GCGACCC	1940	20.92783	9