H55FTAFXY_n01_p6e11.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H55FTAFXY_n01_p6e11.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	366704
Sequences flagged as poor quality	0
Sequence length	151
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2708	0.7384702648457612	No Hit
GTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	905	0.24679305379815875	No Hit
CTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	753	0.20534272874034643	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	741	0.20207033465683497	No Hit
CCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCCGGAATTTTAACCGG	495	0.13498625594484925	No Hit
GACGTGTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	492	0.13416815742397137	No Hit
CGTCTAGATCGGAAGAGCACACGTCTAGATCGGAAGAGCACACGTCTAGA	474	0.12925956629870414	Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)
ACCTATACCCGGCCGTCGGGGCAAGAGCCAGGCCTCGATGAGTAGGAGGG	392	0.10689820672804223	No Hit
CGTGTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	383	0.1044439111654086	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTCTAGA	125	0.0	69.61886	1
GTACTAT	40	0.0060413647	54.38973	1
CATAGTA	45	0.009634378	48.33324	8
ATCTAGC	280	0.0	41.428493	7
ATCTATC	190	5.4060365E-9	34.34204	7
TAACACA	85	0.0027397573	34.117584	4
TCTGACC	335	0.0	32.462624	8
CTAAGCG	90	0.003625292	32.22216	4
GATCTTT	1415	0.0	31.766726	6
ATCTTTT	1355	0.0	31.568205	7
CTGACCT	185	1.6388367E-7	31.35129	9
TCTTTTT	1325	0.0	31.18862	8
CTAGACG	610	0.0	29.713058	3
CGATCTT	2605	0.0	29.500906	5
CTATCCA	100	0.0060695643	28.999947	9
CTTTTTT	1420	0.0	28.591497	9
TCTAGAC	635	0.0	28.543255	2
TCTAGCC	310	2.7284841E-11	28.064465	8
CCCCTAG	105	0.007692015	27.626528	1
CTTGCTC	105	0.0077022617	27.618996	3