H55FTAFXY_n01_p6d8.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H55FTAFXY_n01_p6d8.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	448860
Sequences flagged as poor quality	0
Sequence length	151
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3227	0.718932406541015	No Hit
GTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1786	0.3978968943545872	No Hit
CTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1437	0.3201443657265071	No Hit
GACGTGTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	893	0.1989484471772936	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	824	0.18357617074366173	No Hit
CGTGTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	697	0.1552822706411799	No Hit
TTGTAGACGTGTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTT	629	0.14013278082252817	Illumina Multiplexing PCR Primer 2.01 (95% over 22bp)
CCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCCGGAATTTTAACCGG	571	0.1272111571536782	No Hit
TTCTAGACGTGTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTT	478	0.10649200196052222	Illumina Multiplexing PCR Primer 2.01 (95% over 22bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTCTAGA	125	0.0	69.6	1
ATTCTAC	35	0.003565223	62.142857	3
TGTAGAC	310	0.0	44.435486	2
ACTGTAT	100	2.7307578E-6	43.5	8
TTAGAGT	175	2.4228939E-9	37.285713	4
TAGAGTG	200	2.237357E-10	36.25	5
TAGACGT	1000	0.0	36.25	4
GTATTAT	85	0.002740383	34.11765	1
CTAGGGA	255	1.8189894E-12	34.117645	3
TCTGTCC	215	4.8567017E-10	33.720932	8
TCTAGGG	175	1.0070835E-7	33.142857	2
GATCTTT	2260	0.0	33.042034	6
TACTGTA	110	2.4340206E-4	32.954548	7
GGACCGT	110	2.4340206E-4	32.954548	6
CCGATCT	10950	0.0	32.906395	4
CGATCTT	3460	0.0	32.8974	5
CTTCCGA	11055	0.0	32.856174	1
TTCCGAT	11050	0.0	32.674206	2
CTAGACG	445	0.0	32.58427	3
ATCTTAC	245	5.4569682E-11	32.55102	7