H55FTAFXY_n01_p6d11.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H55FTAFXY_n01_p6d11.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	360112
Sequences flagged as poor quality	0
Sequence length	151
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1962	0.5448304971786555	No Hit
GTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	778	0.2160438974541254	No Hit
CTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	673	0.18688630203936551	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	534	0.14828719953792155	No Hit
GACGTGTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	410	0.11385346781001467	No Hit
GTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAAC	371	0.10302350379881814	No Hit
CCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCCGGAATTTTAACCGG	370	0.10274581241391566	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATTATGC	80	3.7298858E-5	45.312454	3
ACTGACA	75	0.0014821317	38.66663	8
GTCTAGG	115	7.12325E-6	37.831303	1
TTCTAGA	145	8.6685213E-7	35.004826	1
TCTATAC	85	0.0027396795	34.117615	3
GCATATC	110	2.4330843E-4	32.95451	7
TGTAGAC	245	5.4569682E-11	32.55099	2
CTAACGT	290	0.0	32.49997	3
GATCTTT	1225	0.0	31.959154	6
CCTAAAC	115	3.1581303E-4	31.521708	3
CCTAACG	300	0.0	31.416636	2
CCCTAAC	325	0.0	31.235075	1
CTATACA	95	0.004723345	30.526285	4
TCTTTTT	1185	0.0	29.367062	8
ATCTTTT	1215	0.0	29.238655	7
AACGTTG	325	1.8189894E-12	28.999971	5
ATCTCGC	375	0.0	28.999971	7
TAAGCAT	150	4.3910193E-5	28.999971	4
CGATCTT	2170	0.0	28.73269	5
ATCTAGC	255	3.0104275E-9	28.431345	7