H55FTAFXY_n01_p6c7.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H55FTAFXY_n01_p6c7.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	100350
Sequences flagged as poor quality	0
Sequence length	151
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	311	0.30991529646238164	No Hit
GTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	207	0.20627802690582958	No Hit
CTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	145	0.14449427005480817	No Hit
GACGTGTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	121	0.12057797708021924	No Hit
CCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCCGGAATTTTAACCGG	119	0.11858495266567017	No Hit
ACCTATACCCGGCCGTCGGGGCAAGAGCCAGGCCTCGATGAGTAGGAGGG	115	0.114598903836572	No Hit
GTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAAC	111	0.11061285500747384	No Hit
TTGTAGACGTGTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTT	109	0.10861983059292477	Illumina Multiplexing PCR Primer 2.01 (95% over 22bp)
CCTATAAGCAACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGA	107	0.1066268061783757	No Hit
CGTGTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	106	0.10563029397110116	No Hit
GAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTAGGGCGCGAGCCCGGGC	102	0.10164424514200299	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACAAA	30	0.0019306536	72.5	1
CTGACCC	30	0.0019306536	72.5	9
ACTGGGT	30	0.0019306536	72.5	3
TATAATG	35	0.0035571628	62.142857	3
ATCTGAC	110	2.5465852E-11	59.318184	7
ATCTTGC	75	3.726982E-7	58.0	7
CCTATAA	75	3.726982E-7	58.0	1
TCTGACC	65	1.0865311E-5	55.769234	8
ATCTGTG	40	0.0060350974	54.375	7
CTATAAG	85	8.8439083E-7	51.176468	2
GGATTCT	45	0.009614076	48.333336	1
TATAAGC	95	1.9035433E-6	45.789474	3
ATAAGCA	100	2.7095102E-6	43.5	4
TAGACGT	170	1.7953425E-9	38.38235	4
CTAGACG	95	1.02229424E-4	38.157894	3
GATCTAG	95	1.02229424E-4	38.157894	6
CGATCTT	610	0.0	38.032787	5
TAAGCAA	115	7.078752E-6	37.826084	5
CCGATCT	2170	0.0	36.751152	4
CGATCTG	710	0.0	35.739433	5