H55FTAFXY_n01_p6c11.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H55FTAFXY_n01_p6c11.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	67682
Sequences flagged as poor quality	0
Sequence length	151
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	204	0.30140953281522415	No Hit
CCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCCGGAATTTTAACCGG	129	0.1905972045743329	No Hit
GTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACT	125	0.18468721373481872	No Hit
GTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAAC	115	0.16991223663603322	No Hit
CCTATAAGCAACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGA	103	0.15218226411749064	No Hit
GAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGA	101	0.14922726869773353	No Hit
ACCTATACCCGGCCGTCGGGGCAAGAGCCAGGCCTCGATGAGTAGGAGGG	99	0.14627227327797643	No Hit
GGATAACATCATAGGATTTCGATCCTATTGTGTTGGCCTTCGGGATCGGA	95	0.14036228243846222	No Hit
GAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTAGGGCGCGAGCCCGGGC	94	0.13888478472858368	No Hit
GTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	87	0.12854230075943382	No Hit
GGTAGGACGTGTCGGCTGCTTTGTTGAGCCGTCACACGGAATCGAGAGCT	86	0.12706480304955528	No Hit
GTCTTAATCGACCAACACCCTTTGTGGGTTCTAGGTTAGCGCGCAGTTGG	76	0.11228982595076976	No Hit
CTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTT	75	0.11081232824089124	No Hit
TCTCCGGACTCCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCCGGAA	72	0.10637983511125558	No Hit
AAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCATGGGA	71	0.10490233740137703	No Hit
CTCATAAGGTGCCAGCGGAGTCCTATAAGCAACATCCGCTGATCCCTGGT	68	0.10046984427174138	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGGTAA	30	0.001927923	72.5	8
AGACGCG	35	0.0035521504	62.142857	145
GATCTGT	140	0.0	56.964287	6
AAGCGTC	40	0.006026625	54.374996	9
TCTAGCT	40	0.006026625	54.374996	3
ATCTGAC	40	0.006026625	54.374996	7
CGATCTG	435	0.0	53.333332	5
GAAGCGT	60	4.912239E-4	48.333332	8
TCTGTCC	45	0.00960063	48.333332	8
CTTTGGG	45	0.00960063	48.333332	2
TCTGGAG	45	0.00960063	48.333332	2
GATCTCG	140	2.6375346E-10	46.607143	6
CCGATCT	1265	0.0	45.27668	4
AGGGTAG	65	7.287999E-4	44.615383	5
TTCCGAT	1285	0.0	44.571987	2
CTTCCGA	1340	0.0	42.742535	1
TCCGATC	1355	0.0	42.26937	3
CGATCTA	190	1.8189894E-12	41.973686	5
ATTTAGC	70	0.0010496642	41.42857	2
GCTTTGG	70	0.0010496642	41.42857	1