H55FTAFXY_n01_p6b12.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H55FTAFXY_n01_p6b12.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	56356
Sequences flagged as poor quality	0
Sequence length	151
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	174	0.3087515082688622	No Hit
GTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	97	0.17212009369011286	No Hit
CCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCCGGAATTTTAACCGG	88	0.1561501880899993	No Hit
CTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	73	0.1295336787564767	No Hit
CGTGTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	67	0.11888707502306765	No Hit
GACGTGTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	65	0.1153382071119313	No Hit
GTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAAC	61	0.10824047128965861	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	59	0.10469160337852226	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCCCGG	25	9.3405176E-4	87.0	6
CAGAGTG	30	0.0019262439	72.49999	4
ATTAGAG	40	0.006021413	54.375	3
TCTCTAC	40	0.006021413	54.375	8
GTACTGG	40	0.006021413	54.375	1
CCTAACG	55	3.1929617E-4	52.727276	2
CTAACGT	55	3.1929617E-4	52.727276	3
CTAGAAA	45	0.00959236	48.333332	4
GGTTAAG	45	0.00959236	48.333332	1
GTAGACG	80	3.6896963E-5	45.3125	3
CCCTAAC	65	7.2775775E-4	44.615383	1
TAGACGT	110	5.176342E-6	39.545456	4
AACGTTG	75	0.0014715253	38.666664	5
TAACGTT	75	0.0014715253	38.666664	4
AATCGGA	75	0.0014715253	38.666664	1
TAGACAG	80	0.0020203777	36.25	5
GATCTGA	105	1.8316673E-4	34.523808	6
ACGTTGC	85	0.0027201886	34.117645	6
CCGGGAG	90	0.0035994733	32.22222	9
CGTTGCC	90	0.0035994733	32.22222	7