FastQCFastQC Report
Wed 27 Apr 2022
H53K3DRX2_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH53K3DRX2_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1016132919
Sequences flagged as poor quality0
Sequence length10
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGTGGAGAG33782995633.2466304046587No Hit
CGGAACCCAA31797492031.29265020888473No Hit
CGTGACATGC30444011129.960658227627007No Hit
GGGGGGGGGG258226782.5412697017446No Hit
AAGTGGCGAG41514770.40855649122022No Hit
AATTACATAC11312790.11133179319820855No Hit
CGTACCCAAA10799810.10628343790523335No Hit
GGTACCCAAA10165360.10003966813715637No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)