FastQCFastQC Report
Sun 14 May 2023
H52YHDSX7_l03_n01_14R_1-10re.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH52YHDSX7_l03_n01_14R_1-10re.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23113701
Sequences flagged as poor quality0
Sequence length101
%GC36

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA259390511.222369797030773No Hit
CGTCTGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA6261482.7089906545040106No Hit
ACGTCTTAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA944800.40876188542890646No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG674050.2916235699336943No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT477370.20653118252243552No Hit
CACGTCTGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA371980.16093484985377288No Hit
GGGGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG336900.1457577044887792No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA291000.12589935294222246No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA279440.12089799033049706No Hit
ACGTCTGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA236740.10242409902248022No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)