Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content H52VTDRX3_n01_S1_PBMC_PIC_BCell H52VTDRX3_n01_S1_PBMC_PIC_BCell.fastq.gz Conventional base calls Sanger / Illumina 1.9 107618650.0 0.0 26.0 52.0 11.517834700150146 26.0 pass pass pass pass warn pass pass pass fail warn pass H52VTDRX3_n01_S1_PBMC_PIC_GEX H52VTDRX3_n01_S1_PBMC_PIC_GEX.fastq.gz Conventional base calls Sanger / Illumina 1.9 407283585.0 0.0 26.0 52.0 17.012254660042245 26.0 pass pass pass pass pass pass pass pass fail pass pass H52VTDRX3_n01_S1_PBMC_PIC_SP H52VTDRX3_n01_S1_PBMC_PIC_SP.fastq.gz Conventional base calls Sanger / Illumina 1.9 61113411.0 0.0 26.0 52.0 66.19976450722335 26.0 pass pass pass pass fail pass pass pass warn pass pass H52VTDRX3_n01_S1_PBMC_PIC_TCell H52VTDRX3_n01_S1_PBMC_PIC_TCell.fastq.gz Conventional base calls Sanger / Illumina 1.9 77151117.0 0.0 26.0 52.0 4.965115387387425 26.0 pass pass pass pass pass pass pass pass fail pass pass H52VTDRX3_n01_S2_PBMC_GEX H52VTDRX3_n01_S2_PBMC_GEX.fastq.gz Conventional base calls Sanger / Illumina 1.9 422056443.0 0.0 26.0 52.0 22.438069734380573 26.0 pass pass pass pass pass pass pass pass fail pass pass H52VTDRX3_n01_S2_PBMC_PIC_BCell H52VTDRX3_n01_S2_PBMC_PIC_BCell.fastq.gz Conventional base calls Sanger / Illumina 1.9 84166331.0 0.0 26.0 52.0 16.93245292217679 26.0 pass pass pass pass pass pass pass pass fail pass pass H52VTDRX3_n01_S2_PBMC_PIC_TCell H52VTDRX3_n01_S2_PBMC_PIC_TCell.fastq.gz Conventional base calls Sanger / Illumina 1.9 91609561.0 0.0 26.0 52.0 4.613542908632309 26.0 pass pass pass pass pass pass pass pass fail pass pass H52VTDRX3_n01_S2_PBMC_SP H52VTDRX3_n01_S2_PBMC_SP.fastq.gz Conventional base calls Sanger / Illumina 1.9 55977302.0 0.0 26.0 51.0 78.78858746399031 26.0 pass pass pass pass warn pass pass pass pass pass pass H52VTDRX3_n01_S3_PBMC_MDCK_BCell H52VTDRX3_n01_S3_PBMC_MDCK_BCell.fastq.gz Conventional base calls Sanger / Illumina 1.9 86286122.0 0.0 26.0 51.0 42.61052068832963 26.0 pass pass pass pass pass pass pass pass fail pass pass H52VTDRX3_n01_S3_PBMC_MDCK_GEX H52VTDRX3_n01_S3_PBMC_MDCK_GEX.fastq.gz Conventional base calls Sanger / Illumina 1.9 417174776.0 0.0 26.0 52.0 62.1022572213312 26.0 pass pass pass pass pass pass pass pass warn pass pass H52VTDRX3_n01_S3_PBMC_MDCK_SP H52VTDRX3_n01_S3_PBMC_MDCK_SP.fastq.gz Conventional base calls Sanger / Illumina 1.9 55859456.0 0.0 26.0 51.0 74.42458623017973 26.0 pass pass pass pass warn pass pass pass pass pass pass H52VTDRX3_n01_S3_PBMC_MDCK_TCell H52VTDRX3_n01_S3_PBMC_MDCK_TCell.fastq.gz Conventional base calls Sanger / Illumina 1.9 89682521.0 0.0 26.0 51.0 27.073102198018496 26.0 pass pass pass pass pass pass pass pass fail pass pass H52VTDRX3_n01_undetermined H52VTDRX3_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 137637651.0 0.0 26.0 48.0 48.67931051650765 26.0 pass pass pass pass pass pass pass pass fail pass pass H52VTDRX3_n02_S1_PBMC_PIC_BCell H52VTDRX3_n02_S1_PBMC_PIC_BCell.fastq.gz Conventional base calls Sanger / Illumina 1.9 107618650.0 0.0 90.0 55.0 14.557768223618941 90.0 pass pass pass pass pass fail pass pass fail fail pass H52VTDRX3_n02_S1_PBMC_PIC_GEX H52VTDRX3_n02_S1_PBMC_PIC_GEX.fastq.gz Conventional base calls Sanger / Illumina 1.9 407283585.0 0.0 90.0 53.0 15.782870351148626 90.0 pass pass pass pass warn pass pass pass fail fail pass H52VTDRX3_n02_S1_PBMC_PIC_SP H52VTDRX3_n02_S1_PBMC_PIC_SP.fastq.gz Conventional base calls Sanger / Illumina 1.9 61113411.0 0.0 90.0 50.0 83.50588238263482 90.0 pass pass pass pass fail fail pass pass pass warn fail H52VTDRX3_n02_S1_PBMC_PIC_TCell H52VTDRX3_n02_S1_PBMC_PIC_TCell.fastq.gz Conventional base calls Sanger / Illumina 1.9 77151117.0 0.0 90.0 53.0 6.774120167582201 90.0 pass pass pass pass fail fail pass pass fail fail pass H52VTDRX3_n02_S2_PBMC_GEX H52VTDRX3_n02_S2_PBMC_GEX.fastq.gz Conventional base calls Sanger / Illumina 1.9 422056443.0 0.0 90.0 52.0 14.208188336505293 90.0 pass pass pass pass warn warn pass pass fail fail pass H52VTDRX3_n02_S2_PBMC_PIC_BCell H52VTDRX3_n02_S2_PBMC_PIC_BCell.fastq.gz Conventional base calls Sanger / Illumina 1.9 84166331.0 0.0 90.0 55.0 16.33885081745721 90.0 pass pass pass pass pass fail pass pass fail fail pass H52VTDRX3_n02_S2_PBMC_PIC_TCell H52VTDRX3_n02_S2_PBMC_PIC_TCell.fastq.gz Conventional base calls Sanger / Illumina 1.9 91609561.0 0.0 90.0 52.0 5.650851234415903 90.0 pass pass pass pass fail fail pass pass fail fail pass H52VTDRX3_n02_S2_PBMC_SP H52VTDRX3_n02_S2_PBMC_SP.fastq.gz Conventional base calls Sanger / Illumina 1.9 55977302.0 0.0 90.0 50.0 85.72766742792743 90.0 pass pass pass pass fail fail pass pass pass warn fail H52VTDRX3_n02_S3_PBMC_MDCK_BCell H52VTDRX3_n02_S3_PBMC_MDCK_BCell.fastq.gz Conventional base calls Sanger / Illumina 1.9 86286122.0 0.0 90.0 55.0 30.94812016247514 90.0 pass pass pass pass pass pass pass pass fail fail pass H52VTDRX3_n02_S3_PBMC_MDCK_GEX H52VTDRX3_n02_S3_PBMC_MDCK_GEX.fastq.gz Conventional base calls Sanger / Illumina 1.9 417174776.0 0.0 90.0 54.0 14.240086246651359 90.0 pass pass pass pass warn pass pass pass fail fail pass H52VTDRX3_n02_S3_PBMC_MDCK_SP H52VTDRX3_n02_S3_PBMC_MDCK_SP.fastq.gz Conventional base calls Sanger / Illumina 1.9 55859456.0 0.0 90.0 50.0 79.27275690965926 90.0 pass pass pass pass fail fail pass pass pass warn fail H52VTDRX3_n02_S3_PBMC_MDCK_TCell H52VTDRX3_n02_S3_PBMC_MDCK_TCell.fastq.gz Conventional base calls Sanger / Illumina 1.9 89682521.0 0.0 90.0 54.0 24.087822036826665 90.0 pass pass pass pass warn fail pass pass fail fail pass H52VTDRX3_n02_undetermined H52VTDRX3_n02_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 137637651.0 0.0 90.0 49.0 28.921476462659225 90.0 pass pass pass pass pass fail pass pass fail fail warn