[2023-05-15 23:26:38,902] multiqc [DEBUG ] No MultiQC config found: /share/apps/multiqc/1.9/lib/python3.8/site-packages/multiqc_config.yaml [2023-05-15 23:26:38,902] multiqc [DEBUG ] No MultiQC config found: /home/gencore/.multiqc_config.yaml [2023-05-15 23:26:38,902] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml [2023-05-15 23:26:38,905] multiqc [DEBUG ] Loading config settings from: /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml [2023-05-15 23:26:38,905] multiqc [DEBUG ] New config 'report_section_order': {'general_stats': {'order': 1000}, 'demux_report': {'order': 900}, 'demux_report-1': {'order': 900}, 'demux_report-2': {'order': 900}, 'undetermined_barcodes': {'order': 800}, 'run_stats': {'order': 700}, 'fastqc': {'order': 500}} [2023-05-15 23:26:38,905] multiqc [DEBUG ] Command used: /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/H52VTDRX3/merged [2023-05-15 23:26:39,082] multiqc [WARNING] MultiQC Version v1.14 now available! [2023-05-15 23:26:39,082] multiqc [INFO ] This is MultiQC v1.9 [2023-05-15 23:26:39,083] multiqc [DEBUG ] Command : /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/H52VTDRX3/merged [2023-05-15 23:26:39,083] multiqc [DEBUG ] Working dir : /scratch/gencore/logs/html/H52VTDRX3/merged [2023-05-15 23:26:39,083] multiqc [INFO ] Template : default [2023-05-15 23:26:39,083] multiqc [DEBUG ] Running Python 3.8.6 (default, Oct 11 2020, 20:34:31) [GCC Intel(R) C++ gcc 8.3.1 mode] [2023-05-15 23:26:39,083] multiqc [INFO ] Searching : /scratch/gencore/logs/html/H52VTDRX3/merged [2023-05-15 23:26:39,083] multiqc [DEBUG ] Analysing modules: custom_content, conpair, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, goleft_indexcov, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, homer, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, mtnucratio, picard, prokka, samblaster, samtools, sexdeterrmine, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, interop, ivar, flash, seqyclean [2023-05-15 23:26:39,083] multiqc [DEBUG ] Using temporary directory for creating report: /state/partition1/job-33409449/tmpdv1t855r [2023-05-15 23:26:39,209] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H52VTDRX3_n02_S2_PBMC_PIC_BCell_fastqc.html [2023-05-15 23:26:39,212] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H52VTDRX3_n02_S2_PBMC_PIC_BCell_fastqc.html [2023-05-15 23:26:39,279] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H52VTDRX3_n02_S3_PBMC_MDCK_SP_fastqc.html [2023-05-15 23:26:39,282] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H52VTDRX3_n02_S3_PBMC_MDCK_SP_fastqc.html [2023-05-15 23:26:39,347] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H52VTDRX3_n02_S1_PBMC_PIC_TCell_fastqc.html [2023-05-15 23:26:39,350] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H52VTDRX3_n02_S1_PBMC_PIC_TCell_fastqc.html [2023-05-15 23:26:39,438] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H52VTDRX3_n02_S1_PBMC_PIC_SP_fastqc.html [2023-05-15 23:26:39,440] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H52VTDRX3_n02_S1_PBMC_PIC_SP_fastqc.html [2023-05-15 23:26:39,511] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H52VTDRX3_n01_S3_PBMC_MDCK_BCell_fastqc.html [2023-05-15 23:26:39,513] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H52VTDRX3_n01_S3_PBMC_MDCK_BCell_fastqc.html [2023-05-15 23:26:39,585] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H52VTDRX3_n01_S2_PBMC_SP_fastqc.html [2023-05-15 23:26:39,587] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H52VTDRX3_n01_S2_PBMC_SP_fastqc.html [2023-05-15 23:26:39,653] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H52VTDRX3_n02_S1_PBMC_PIC_BCell_fastqc.html [2023-05-15 23:26:39,655] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H52VTDRX3_n02_S1_PBMC_PIC_BCell_fastqc.html [2023-05-15 23:26:39,722] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H52VTDRX3_n01_S2_PBMC_PIC_TCell_fastqc.html [2023-05-15 23:26:39,724] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H52VTDRX3_n01_S2_PBMC_PIC_TCell_fastqc.html [2023-05-15 23:26:39,782] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H52VTDRX3_n02_S2_PBMC_SP_fastqc.html [2023-05-15 23:26:39,785] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H52VTDRX3_n02_S2_PBMC_SP_fastqc.html [2023-05-15 23:26:39,844] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H52VTDRX3_n02_S3_PBMC_MDCK_GEX_fastqc.html [2023-05-15 23:26:39,847] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H52VTDRX3_n02_S3_PBMC_MDCK_GEX_fastqc.html [2023-05-15 23:26:39,929] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H52VTDRX3_n02_undetermined_fastqc.html [2023-05-15 23:26:39,932] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H52VTDRX3_n02_undetermined_fastqc.html [2023-05-15 23:26:39,993] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H52VTDRX3_n01_undetermined_fastqc.html [2023-05-15 23:26:39,995] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H52VTDRX3_n01_undetermined_fastqc.html [2023-05-15 23:26:40,059] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H52VTDRX3_n01_S1_PBMC_PIC_TCell_fastqc.html [2023-05-15 23:26:40,061] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H52VTDRX3_n01_S1_PBMC_PIC_TCell_fastqc.html [2023-05-15 23:26:40,111] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H52VTDRX3_n02_S1_PBMC_PIC_GEX_fastqc.html [2023-05-15 23:26:40,113] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H52VTDRX3_n02_S1_PBMC_PIC_GEX_fastqc.html [2023-05-15 23:26:40,188] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H52VTDRX3_n02_S2_PBMC_PIC_TCell_fastqc.html [2023-05-15 23:26:40,190] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H52VTDRX3_n02_S2_PBMC_PIC_TCell_fastqc.html [2023-05-15 23:26:40,284] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H52VTDRX3_n01_S3_PBMC_MDCK_SP_fastqc.html [2023-05-15 23:26:40,286] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H52VTDRX3_n01_S3_PBMC_MDCK_SP_fastqc.html [2023-05-15 23:26:40,354] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H52VTDRX3_n01_S3_PBMC_MDCK_TCell_fastqc.html [2023-05-15 23:26:40,356] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H52VTDRX3_n01_S3_PBMC_MDCK_TCell_fastqc.html [2023-05-15 23:26:40,404] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H52VTDRX3_n02_S2_PBMC_GEX_fastqc.html [2023-05-15 23:26:40,407] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H52VTDRX3_n02_S2_PBMC_GEX_fastqc.html [2023-05-15 23:26:40,475] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H52VTDRX3_n02_S3_PBMC_MDCK_TCell_fastqc.html [2023-05-15 23:26:40,478] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H52VTDRX3_n02_S3_PBMC_MDCK_TCell_fastqc.html [2023-05-15 23:26:40,541] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H52VTDRX3_n01_S1_PBMC_PIC_SP_fastqc.html [2023-05-15 23:26:40,544] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H52VTDRX3_n01_S1_PBMC_PIC_SP_fastqc.html [2023-05-15 23:26:40,651] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H52VTDRX3_n01_S3_PBMC_MDCK_GEX_fastqc.html [2023-05-15 23:26:40,654] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H52VTDRX3_n01_S3_PBMC_MDCK_GEX_fastqc.html [2023-05-15 23:26:40,724] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H52VTDRX3_n01_S2_PBMC_PIC_BCell_fastqc.html [2023-05-15 23:26:40,726] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H52VTDRX3_n01_S2_PBMC_PIC_BCell_fastqc.html [2023-05-15 23:26:40,803] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H52VTDRX3_n01_S2_PBMC_GEX_fastqc.html [2023-05-15 23:26:40,805] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H52VTDRX3_n01_S2_PBMC_GEX_fastqc.html [2023-05-15 23:26:40,873] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H52VTDRX3_n01_S1_PBMC_PIC_BCell_fastqc.html [2023-05-15 23:26:40,875] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H52VTDRX3_n01_S1_PBMC_PIC_BCell_fastqc.html [2023-05-15 23:26:40,938] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H52VTDRX3_n02_S3_PBMC_MDCK_BCell_fastqc.html [2023-05-15 23:26:40,940] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H52VTDRX3_n02_S3_PBMC_MDCK_BCell_fastqc.html [2023-05-15 23:26:41,009] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H52VTDRX3_n01_S1_PBMC_PIC_GEX_fastqc.html [2023-05-15 23:26:41,012] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H52VTDRX3_n01_S1_PBMC_PIC_GEX_fastqc.html [2023-05-15 23:26:41,562] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.3.2 [2023-05-15 23:26:41,564] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.3.2 [2023-05-15 23:26:41,572] multiqc.modules.custom_content.custom_content [INFO ] run_stats: Found 1 samples (table) [2023-05-15 23:26:41,582] multiqc.modules.custom_content.custom_content [INFO ] undetermined_barcodes: Found 20 samples (table) [2023-05-15 23:26:41,589] multiqc.modules.custom_content.custom_content [INFO ] demux_report: Found 13 samples (table) [2023-05-15 23:26:41,596] multiqc [DEBUG ] No samples found: conpair [2023-05-15 23:26:41,601] multiqc [DEBUG ] No samples found: peddy [2023-05-15 23:26:41,606] multiqc [DEBUG ] No samples found: somalier [2023-05-15 23:26:41,611] multiqc [DEBUG ] No samples found: methylQA [2023-05-15 23:26:41,619] multiqc [DEBUG ] No samples found: mosdepth [2023-05-15 23:26:41,623] multiqc [DEBUG ] No samples found: phantompeakqualtools [2023-05-15 23:26:41,627] multiqc [DEBUG ] No samples found: qualimap [2023-05-15 23:26:41,632] multiqc [DEBUG ] No samples found: preseq [2023-05-15 23:26:41,637] multiqc [DEBUG ] No samples found: quast [2023-05-15 23:26:41,642] multiqc [DEBUG ] No samples found: qorts [2023-05-15 23:26:41,648] multiqc [DEBUG ] No samples found: rna_seqc [2023-05-15 23:26:41,653] multiqc [DEBUG ] No samples found: rockhopper [2023-05-15 23:26:41,658] multiqc [DEBUG ] No samples found: rsem [2023-05-15 23:26:41,669] multiqc [DEBUG ] No samples found: rseqc [2023-05-15 23:26:41,674] multiqc [DEBUG ] No samples found: busco [2023-05-15 23:26:41,679] multiqc [DEBUG ] No samples found: goleft_indexcov [2023-05-15 23:26:41,683] multiqc [DEBUG ] No samples found: disambiguate [2023-05-15 23:26:41,688] multiqc [DEBUG ] No samples found: supernova [2023-05-15 23:26:41,702] multiqc [DEBUG ] No samples found: deeptools [2023-05-15 23:26:41,708] multiqc [DEBUG ] No samples found: sargasso [2023-05-15 23:26:41,713] multiqc [DEBUG ] No samples found: verifybamid [2023-05-15 23:26:41,718] multiqc [DEBUG ] No samples found: mirtrace [2023-05-15 23:26:41,723] multiqc [DEBUG ] No samples found: happy [2023-05-15 23:26:41,728] multiqc [DEBUG ] No samples found: mirtop [2023-05-15 23:26:41,734] multiqc [DEBUG ] No samples found: homer [2023-05-15 23:26:41,740] multiqc [DEBUG ] No samples found: macs2 [2023-05-15 23:26:41,746] multiqc [DEBUG ] No samples found: theta2 [2023-05-15 23:26:41,751] multiqc [DEBUG ] No samples found: snpeff [2023-05-15 23:26:41,769] multiqc [DEBUG ] No samples found: gatk [2023-05-15 23:26:41,774] multiqc [DEBUG ] No samples found: htseq [2023-05-15 23:26:41,780] multiqc [DEBUG ] No samples found: bcftools [2023-05-15 23:26:41,786] multiqc [DEBUG ] No samples found: featureCounts [2023-05-15 23:26:41,792] multiqc [DEBUG ] No samples found: fgbio [2023-05-15 23:26:41,806] multiqc [DEBUG ] No samples found: dragen [2023-05-15 23:26:41,811] multiqc [DEBUG ] No samples found: dedup [2023-05-15 23:26:41,816] multiqc [DEBUG ] No samples found: damageprofiler [2023-05-15 23:26:41,839] multiqc [DEBUG ] No samples found: biobambam2 [2023-05-15 23:26:41,845] multiqc [DEBUG ] No samples found: mtnucratio [2023-05-15 23:26:41,847] multiqc [DEBUG ] No samples found: picard [2023-05-15 23:26:41,852] multiqc [DEBUG ] No samples found: prokka [2023-05-15 23:26:41,856] multiqc [DEBUG ] No samples found: samblaster [2023-05-15 23:26:41,865] multiqc [DEBUG ] No samples found: samtools [2023-05-15 23:26:41,870] multiqc [DEBUG ] No samples found: sexdeterrmine [2023-05-15 23:26:41,875] multiqc [DEBUG ] No samples found: bamtools [2023-05-15 23:26:41,879] multiqc [DEBUG ] No samples found: jellyfish [2023-05-15 23:26:41,911] multiqc [DEBUG ] No samples found: vcftools [2023-05-15 23:26:41,916] multiqc [DEBUG ] No samples found: longranger [2023-05-15 23:26:41,921] multiqc [DEBUG ] No samples found: stacks [2023-05-15 23:26:41,926] multiqc [DEBUG ] No samples found: varscan2 [2023-05-15 23:26:41,945] multiqc [DEBUG ] No samples found: bbmap [2023-05-15 23:26:41,950] multiqc [DEBUG ] No samples found: bismark [2023-05-15 23:26:41,955] multiqc [DEBUG ] No samples found: biscuit [2023-05-15 23:26:41,960] multiqc [DEBUG ] No samples found: hicexplorer [2023-05-15 23:26:41,965] multiqc [DEBUG ] No samples found: hicup [2023-05-15 23:26:41,970] multiqc [DEBUG ] No samples found: hicpro [2023-05-15 23:26:41,974] multiqc [DEBUG ] No samples found: salmon [2023-05-15 23:26:41,979] multiqc [DEBUG ] No samples found: kallisto [2023-05-15 23:26:41,984] multiqc [DEBUG ] No samples found: slamdunk [2023-05-15 23:26:41,989] multiqc [DEBUG ] No samples found: star [2023-05-15 23:26:41,994] multiqc [DEBUG ] No samples found: hisat2 [2023-05-15 23:26:41,999] multiqc [DEBUG ] No samples found: tophat [2023-05-15 23:26:42,004] multiqc [DEBUG ] No samples found: bowtie2 [2023-05-15 23:26:42,008] multiqc [DEBUG ] No samples found: bowtie1 [2023-05-15 23:26:42,013] multiqc [DEBUG ] No samples found: snpsplit [2023-05-15 23:26:42,022] multiqc [DEBUG ] No samples found: kat [2023-05-15 23:26:42,026] multiqc [DEBUG ] No samples found: leehom [2023-05-15 23:26:42,031] multiqc [DEBUG ] No samples found: adapterRemoval [2023-05-15 23:26:42,035] multiqc [DEBUG ] No samples found: clipandmerge [2023-05-15 23:26:42,041] multiqc [DEBUG ] No samples found: cutadapt [2023-05-15 23:26:42,045] multiqc [DEBUG ] No samples found: flexbar [2023-05-15 23:26:42,053] multiqc [DEBUG ] No samples found: kaiju [2023-05-15 23:26:42,060] multiqc [DEBUG ] No samples found: kraken [2023-05-15 23:26:42,064] multiqc [DEBUG ] No samples found: malt [2023-05-15 23:26:42,069] multiqc [DEBUG ] No samples found: trimmomatic [2023-05-15 23:26:42,074] multiqc [DEBUG ] No samples found: sickle [2023-05-15 23:26:42,079] multiqc [DEBUG ] No samples found: skewer [2023-05-15 23:26:42,083] multiqc [DEBUG ] No samples found: sortmerna [2023-05-15 23:26:42,088] multiqc [DEBUG ] No samples found: biobloomtools [2023-05-15 23:26:42,093] multiqc [DEBUG ] No samples found: fastq_screen [2023-05-15 23:26:42,099] multiqc [DEBUG ] No samples found: afterqc [2023-05-15 23:26:42,104] multiqc [DEBUG ] No samples found: fastp [2023-05-15 23:26:44,040] multiqc.modules.fastqc.fastqc [INFO ] Found 26 reports [2023-05-15 23:26:44,255] multiqc [DEBUG ] No samples found: pycoqc [2023-05-15 23:26:44,260] multiqc [DEBUG ] No samples found: minionqc [2023-05-15 23:26:44,265] multiqc [DEBUG ] No samples found: multivcfanalyzer [2023-05-15 23:26:44,270] multiqc [DEBUG ] No samples found: clusterflow [2023-05-15 23:26:44,275] multiqc [DEBUG ] No samples found: bcl2fastq [2023-05-15 23:26:44,280] multiqc [DEBUG ] No samples found: interop [2023-05-15 23:26:44,284] multiqc [DEBUG ] No samples found: ivar [2023-05-15 23:26:44,289] multiqc [DEBUG ] No samples found: flash [2023-05-15 23:26:44,295] multiqc [DEBUG ] No samples found: seqyclean [2023-05-15 23:26:44,295] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found. [2023-05-15 23:26:44,295] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found. [2023-05-15 23:26:44,295] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found. [2023-05-15 23:26:44,295] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Demultiplexing Report'. [2023-05-15 23:26:44,295] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Demultiplexing Report'. [2023-05-15 23:26:44,295] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Demultiplexing Report'. [2023-05-15 23:26:44,295] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Demultiplexing Report'. [2023-05-15 23:26:44,295] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Demultiplexing Report'. [2023-05-15 23:26:44,295] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Demultiplexing Report'. [2023-05-15 23:26:44,295] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module ' Barcodes of Undetermined Reads'. [2023-05-15 23:26:44,296] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module ' Barcodes of Undetermined Reads'. [2023-05-15 23:26:44,296] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module ' Barcodes of Undetermined Reads'. [2023-05-15 23:26:44,296] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module ' Barcodes of Undetermined Reads'. [2023-05-15 23:26:44,296] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module ' Barcodes of Undetermined Reads'. [2023-05-15 23:26:44,296] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module ' Barcodes of Undetermined Reads'. [2023-05-15 23:26:44,296] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module ' Barcodes of Undetermined Reads'. [2023-05-15 23:26:44,296] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Run Statistics'. [2023-05-15 23:26:44,296] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Run Statistics'. [2023-05-15 23:26:44,296] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'Run Statistics'. [2023-05-15 23:26:44,296] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Run Statistics'. [2023-05-15 23:26:44,296] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Run Statistics'. [2023-05-15 23:26:44,296] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Run Statistics'. [2023-05-15 23:26:44,296] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Run Statistics'. [2023-05-15 23:26:44,296] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'FastQC'. [2023-05-15 23:26:44,296] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'FastQC'. [2023-05-15 23:26:44,296] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'FastQC'. [2023-05-15 23:26:44,296] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'FastQC'. [2023-05-15 23:26:44,296] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'FastQC'. [2023-05-15 23:26:44,296] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'FastQC'. [2023-05-15 23:26:44,296] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'FastQC'. [2023-05-15 23:26:44,330] multiqc [INFO ] Compressing plot data [2023-05-15 23:26:44,749] multiqc [INFO ] Report : multiqc_report.html [2023-05-15 23:26:44,749] multiqc [INFO ] Data : multiqc_data [2023-05-15 23:26:44,749] multiqc [DEBUG ] Moving data file from '/state/partition1/job-33409449/tmpdv1t855r/multiqc_data' to '/scratch/gencore/logs/html/H52VTDRX3/merged/multiqc_data' [2023-05-15 23:26:44,892] multiqc [INFO ] MultiQC complete