FastQCFastQC Report
Fri 24 Jun 2022
H3YJ2BGXM_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH3YJ2BGXM_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences385122071
Sequences flagged as poor quality0
Sequence length10
%GC34

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTACCATTT21723102356.405757903187016No Hit
ACAGTAACTA12968950833.6749092731172No Hit
GGGGGGGGGG231771486.018130287838009No Hit
TCTACCATTA9452290.24543620612177275No Hit
TCTACATTTA5621650.1459706005787448No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)