FastQCFastQC Report
Fri 24 Sep 2021
H3YFLDMXY_n01_undetermined.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH3YFLDMXY_n01_undetermined.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences297683770
Sequences flagged as poor quality0
Sequence length26
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAACTCCAGTCACCCAGGGCAGATCT5490810.18445110393489036No Hit
CCAGTCACCCAGGGCAGATCTCGTAT3777280.12688901380145784No Hit
GAACTCCAGTCACCCTGTGCGGATCT3118470.10475781061224804No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)