FastQCFastQC Report
Sat 18 Jun 2022
H3WMNBGXM_n01_Alex1_R13.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH3WMNBGXM_n01_Alex1_R13.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21287835
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATACACGATCTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGG647749930.428171770403146No Hit
GATCGCGCGGTTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTG494519523.230145291900282No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGT448969021.0904021005424No Hit
ATACACGATCTCTTGTGGAAAGGACGAAACACCGTACCCCTACCAACTGG12947446.082083969553503No Hit
GATCGCGCGGTTCTTGTGGAAAGGACGAAACACCGTACCCCTACCAACTG9788654.59823650455765No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGTACCCCTACCAACTGGT9176274.310569863022708No Hit
ATACACGATCTCTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGT231610.10879922735214735No Hit
ATACACGATCTCTTGTGGAAAGGACGAAACACCGAACCCCTATCAACTGG215160.10107180932208465No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)