FastQCFastQC Report
Sun 21 Apr 2024
H3WG2DSXC_l01_n01_15G_1-10_NEB.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH3WG2DSXC_l01_n01_15G_1-10_NEB.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13101438
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGGGGTAGCGGCTGAAGCACTGCACGCCGTAGGTCAGGGTGGTCACGA344000.2625665976513418No Hit
CTGGTGGACAGCAAATCGGTCGGGATCTGTAGGACGATCACGATAAGGAT297480.22705904496895685No Hit
GGTGGACAGCAAATCGGTCGGGATCTGTAGGACGATCACGATAAGGATCC208850.15940998232407771No Hit
GTGGACAGCAAATCGGTCGGGATCTGTAGGACGATCACGATAAGGATCCG200470.1530137378812921No Hit
GGGGCACAAGCTGGAGTACAACTACAACAGCCACAACGTCTATATCATGG198320.15137269664597122No Hit
ATCCGCCACAACATCGAGGACGGCAGCGTGCAGCTCGCCGACCACTACCA190460.14537335519963535No Hit
CGGGAATTGGATCCGGTACCGAGCTCGAATTCTTACAGCTCGTCCTTCTT163670.12492521813254392No Hit
ATGCGGTTCACCAGGGTGTCGCCCTCGAACTTCACCTCGGCGCGGGTCTT162270.1238566331421024No Hit
GGGGTCTTTGCTCAGGGCGGACTGGGTGCTCAGGTAGTGGTTGTCGGGCA158350.1208645951688662No Hit
GGCGAGGAGCTGTTCACCGGGGTGGTGCCCATCCTGGTCGAGCTGGACGG155830.11894114218607148No Hit
GGCCGACAAGCAGAAGAACGGCATCAAGGTGAACTTCAAGATCCGCCACA153750.11735353020027267No Hit
GCCGCTACCCCGACCACATGAAGCAGCACGACTTCTTCAAGTCCGCCATG153170.11691083070423261No Hit
GGGGGTGTTCTGCTGGTAGTGGTCGGCGAGCTGCACGCTGCCGTCCTCGA152390.11631547620955807No Hit
CCGCCACAACATCGAGGACGGCAGCGTGCAGCTCGCCGACCACTACCAGC145150.11078936525898912No Hit
GCGAGGGCGAGGGCGATGCCACCTACGGCAAGCTGACCCTGAAGTTCATC134440.1026146900821116No Hit
CGCCACAACATCGAGGACGGCAGCGTGCAGCTCGCCGACCACTACCAGCA133610.10198117183777841No Hit
GGCGGACTTGAAGAAGTCGTGCTGCTTCATGTGGTCGGGGTAGCGGCTGA133430.10184378233900737No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)