H3W35AFXY_n02_adr3wtzt14s86.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3W35AFXY_n02_adr3wtzt14s86.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	245902
Sequences flagged as poor quality	0
Sequence length	76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	952	0.3871460988523884	No Hit
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	392	0.15941309952745403	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	387	0.15737976917633853	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	378	0.15371977454433067	No Hit
CGTCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCAC	341	0.13867312994607608	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTCAGTA	15	0.0022228193	70.00001	16
GGATAGT	20	0.0069455723	52.5	1
TGATTGA	20	0.0069455723	52.5	12
TCTGTGT	35	0.0012538452	40.0	8
CCTTACA	40	0.0024157492	35.0	2
TACGCTA	50	1.7065837E-4	35.0	26
CTTAGGC	40	0.0024157492	35.0	3
TAACTGC	40	0.0024157492	35.0	6
GGTACCG	55	2.9866648E-4	31.818184	5
GACACCT	45	0.0043019424	31.111109	7
AGTTCCG	70	3.479812E-5	30.0	32
TCTAGGC	60	4.973041E-4	29.166668	8
GTATGGA	60	4.973041E-4	29.166668	23
ACGCTAT	60	4.973041E-4	29.166668	27
ACTGAAT	75	5.570484E-5	28.0	8
CCTACAG	50	0.0071995244	27.999998	5
TGGTTAC	50	0.0071995244	27.999998	6
TTACACT	65	7.9414615E-4	26.923077	4
CATAGGT	80	8.6435015E-5	26.25	16
TACACTG	80	8.6435015E-5	26.25	5